Bicluster


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Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.17837193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18117197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.24587718136get_template_part( ).../page.php:28
60.24587718712locate_template( ).../general-template.php:206
70.24587718840load_template( ).../template.php:720
80.24587719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.24667736328the_content( ).../content-page.php:22
100.24687736576apply_filters( ).../post-template.php:256
110.24687736976WP_Hook->apply_filters( ).../plugin.php:205
120.24777742504do_shortcode( ).../class-wp-hook.php:310
130.24787748560preg_replace_callback ( ).../shortcodes.php:273
140.24787749184do_shortcode_tag( ).../shortcodes.php:273
150.24797749184bicluster_info_shortcode( ).../shortcodes.php:433
160.24797749384file_get_contents ( ).../short_codes.php:666

( ! ) Notice: Trying to get property 'bicluster' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 667
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.17837193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18117197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.24587718136get_template_part( ).../page.php:28
60.24587718712locate_template( ).../general-template.php:206
70.24587718840load_template( ).../template.php:720
80.24587719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.24667736328the_content( ).../content-page.php:22
100.24687736576apply_filters( ).../post-template.php:256
110.24687736976WP_Hook->apply_filters( ).../plugin.php:205
120.24777742504do_shortcode( ).../class-wp-hook.php:310
130.24787748560preg_replace_callback ( ).../shortcodes.php:273
140.24787749184do_shortcode_tag( ).../shortcodes.php:273
150.24797749184bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'id' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 669
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.17837193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18117197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.24587718136get_template_part( ).../page.php:28
60.24587718712locate_template( ).../general-template.php:206
70.24587718840load_template( ).../template.php:720
80.24587719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.24667736328the_content( ).../content-page.php:22
100.24687736576apply_filters( ).../post-template.php:256
110.24687736976WP_Hook->apply_filters( ).../plugin.php:205
120.24777742504do_shortcode( ).../class-wp-hook.php:310
130.24787748560preg_replace_callback ( ).../shortcodes.php:273
140.24787749184do_shortcode_tag( ).../shortcodes.php:273
150.24797749184bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'num_conditions' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 670
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.17837193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18117197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.24587718136get_template_part( ).../page.php:28
60.24587718712locate_template( ).../general-template.php:206
70.24587718840load_template( ).../template.php:720
80.24587719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.24667736328the_content( ).../content-page.php:22
100.24687736576apply_filters( ).../post-template.php:256
110.24687736976WP_Hook->apply_filters( ).../plugin.php:205
120.24777742504do_shortcode( ).../class-wp-hook.php:310
130.24787748560preg_replace_callback ( ).../shortcodes.php:273
140.24787749184do_shortcode_tag( ).../shortcodes.php:273
150.24797749184bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'num_genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 671
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.17837193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18117197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.24587718136get_template_part( ).../page.php:28
60.24587718712locate_template( ).../general-template.php:206
70.24587718840load_template( ).../template.php:720
80.24587719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.24667736328the_content( ).../content-page.php:22
100.24687736576apply_filters( ).../post-template.php:256
110.24687736976WP_Hook->apply_filters( ).../plugin.php:205
120.24777742504do_shortcode( ).../class-wp-hook.php:310
130.24787748560preg_replace_callback ( ).../shortcodes.php:273
140.24787749184do_shortcode_tag( ).../shortcodes.php:273
150.24797749184bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'residual' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 672
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.17837193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18117197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.24587718136get_template_part( ).../page.php:28
60.24587718712locate_template( ).../general-template.php:206
70.24587718840load_template( ).../template.php:720
80.24587719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.24667736328the_content( ).../content-page.php:22
100.24687736576apply_filters( ).../post-template.php:256
110.24687736976WP_Hook->apply_filters( ).../plugin.php:205
120.24777742504do_shortcode( ).../class-wp-hook.php:310
130.24787748560preg_replace_callback ( ).../shortcodes.php:273
140.24787749184do_shortcode_tag( ).../shortcodes.php:273
150.24797749184bicluster_info_shortcode( ).../shortcodes.php:433
ID:
# Conditions:
# Genes:
Residual:

Bicluster Motifs

Bicluster Genes

  • Rv0342
  • Rv1082
  • Rv1084
  • Rv1522c
  • Rv1638
  • Rv2038c
  • Rv2364c
  • Rv2470
  • Rv2620c
  • Rv2792c
  • Rv2794c
  • Rv2852c
  • Rv2880c
  • Rv3204
  • Rv3266c
  • Rv3296
  • Rv3450c
  • Rv3604c
  • Rv3644c
  • Rv3756c

Bicluster Conditions

  • H37Rv.0.05..SDS.exposure.for.1h.rep.1
  • H37Rv.0.05..SDS.exposure.for.1h.rep.3
  • H37Rv.0.05..SDS.exposure.for.1h.rep.4
  • H37Rv.0.05..SDS.exposure.for.1h.rep.5
  • H37Rv.vs..H37Rv.SDS.treated.rep.2
  • H37Rv.vs..H37Rv.SDS.treated.rep.3
  • H37Rv.vs..H37Rv.SDS.treated.rep.6
  • X4mM.H2O2vsctrl..1h.
  • X4mM.H2O2vsctrl..2h.A
  • X4mM.H2O2.ctrl..2h...1
  • X4mM.H2O2.ctrl..4h...2
  • H37Rv.diamide.1h.rep.1
  • H37Rv.diamide.1h.rep.2
  • H37Rv.diamide.1h.rep.3
  • H37Rv.diamide.1h.rep.5
  • H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.2
  • H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4
  • H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.6
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6
  • AA_10uM_10.min_01
  • AA_30uM_10.min_04
  • AA_30uM_10.min_05
  • AA_30uM_10.min_07
  • AA_30uM_10m_01
  • AA_30uM_10min_03
  • AA_30uM_1h_03
  • AA_30uM_1h_04
  • AA_30uM_1h_05
  • AA_30uM_1h_06
  • AA_30uM_24h_03
  • AA_30uM_24h_04
  • AA_30uM_2h_01
  • AA_30uM_2h_04
  • AA_30uM_2h_05
  • AA_30uM_2h_06
  • AA_30uM_2h_08
  • AA_30uM_2h_09
  • AA_30uM_30min_01
  • AA_30uM_30min_02
  • AA_30uM_30min_05
  • AA_30uM_30min_07
  • AA_30uM_30min_08
  • AA_30uM_30min_09
  • AA_30uM_4h_02
  • AA_30uM_4h_07
  • AA_30uM_4h_08
  • AA_3uM_10.min_01
  • AA_3uM_10min_02
  • AA_60uM_24h_02
  • AA_60uM_24h_03
  • CHP_25uM_1h_01
  • CHP_25uM_24h_01
  • CHP_25uM_2h_01
  • L2A_30uM_10min_01
  • L2A_30uM_10min_03
  • L2A_30uM_10min_04
  • L2A_30uM_10min_05
  • L2A_30uM_10min_06
  • L2A_30uM_10min_07
  • L2A_30uM_10min_08
  • L2A_30uM_1h_03
  • L2A_30uM_1h_04
  • L2A_30uM_1h_06
  • L2A_30uM_1h_08
  • L2A_30uM_2h_02
  • L2A_30uM_30min_05
  • L2A_30uM_30Min_06
  • L2A_30uM_4h_04
  • L2A_30uM_4h_05
  • L2A_30uM_4h_06
  • L2A_30uM_4h_08
  • OA_50uM_10min_02
  • OA_50uM_10min_03
  • OA_50uM_10min_04
  • OA_50uM_10min_05
  • OA_50uM_10min_06
  • OA_50uM_1h_01
  • OA_50uM_1h_03
  • OA_50uM_1h_04
  • OA_50uM_1h_06
  • OA_50uM_1h_08
  • OA_50uM_1h_10
  • OA_50uM_2h_01
  • OA_50uM_2h_02
  • OA_50uM_2h_03
  • OA_50uM_2h_05
  • OA_50uM_2h_06
  • OA_50uM_2h_07
  • OA_50uM_2h_10
  • OA_50uM_30min_01
  • OA_50uM_30min_02
  • OA_50uM_30min_03
  • OA_50uM_30min_05
  • OA_50uM_30min_06
  • OA_50uM_30min_08
  • OA_50uM_4h_03
  • OA_50uM_4h_05
  • OA_50uM_4h_07
  • OA_50uM_4h_09
  • PA_100uM_24h_01
  • PA_100uM_2h_03
  • PA_100uM_2h_04
  • PA_10uM_10.min_01
  • PA_10uM_10min_02
  • PA_5.uM_10min_02
  • PA_50uM_10.min_02
  • PA_50uM_10min_01
  • PA_50uM_10min_04
  • PA_50uM_10min_05
  • PA_50uM_10min_07
  • PA_50uM_10min_08
  • PA_50uM_10min_09
  • PA_50uM_10min_10
  • PA_50uM_12h_01
  • PA_50uM_12h_03
  • PA_50uM_12h_05
  • PA_50uM_1h_01
  • PA_50uM_1h_02
  • PA_50uM_1h_04
  • PA_50uM_1h_05
  • PA_50uM_1h_07
  • PA_50uM_1h_10
  • PA_50uM_1h_11
  • PA_50uM_1h_12
  • PA_50uM_24h_01
  • PA_50uM_24h_02
  • PA_50uM_24h_04
  • PA_50uM_24h_06
  • PA_50uM_24h_09
  • PA_50uM_24h_10
  • PA_50uM_2h_02
  • PA_50uM_30.min_04
  • PA_50uM_30.min_06
  • PA_50uM_30.min_07
  • PA_50uM_30min_01
  • PA_50uM_30min_08
  • PA_50uM_30min_09
  • PA_50uM_30min_10
  • PA_50uM_30min_11
  • PA_50uM_3d_02
  • PA_50uM_3d_05
  • PA_50uM_3d_06
  • PA_50uM_4h_01
  • PA_50uM_4h_05
  • PA_50uM_4h_07
  • PA_50uM_8h_01
  • PA_50uM_8h_03
  • PA_50uM_8h_04
  • PA_50uM_8h_05
  • SDS_3h_01
  • SDS_60min_01
  • Starvation_1254_12h_01
  • Starvation_1254_12h_04
  • Starvation_1254_24h_01
  • Starvation_1254_24h_04
  • Starvation_1254_24h_05
  • Starvation_1254_24h_06
  • Starvation_1254_3d_01
  • Starvation_1254_3d_02
  • Starvation_1254_3d_03
  • Starvation_1254_5d_01
  • Starvation_1254_5d_02
  • Starvation_1254_5d_04
  • Starvation_1254_6h_05
  • Starvation_1254_OA50_24h_04
  • Starvation_1254_OA50_3d_01
  • Starvation_1254_OA50_3d_02
  • Starvation_1254_OA50_3d_03
  • Starvation_1254_OA50_3d_04
  • Starvation_1254_OA50_5d_01
  • Starvation_1254_PA50_6h_02
  • Starvation_1254_PA50_6h_04
  • Starvation_OA50_24h_01
  • Starvation_OA50_24h_02
  • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.2
  • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3
  • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1
  • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.1
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.1
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.2
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.3
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.6
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.1
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.1
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.3
  • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.1
  • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.2
  • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.3
  • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.6
  • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.1
  • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.2
  • A00470_Q2_t60_diamide
  • A00470_Q3_t90_diamide
  • A00437_Q1_t30_diamide
  • A00437_Q2_t60_diamide
  • A00437_Q3_t90_diamide
  • A00436_Q2_t60_diamide