ID: 552fcd96b744335b89d8e434
# Conditions: 290
# Genes: 30
Residual: 0.55102326906201
# Conditions: 290
# Genes: 30
Residual: 0.55102326906201
Bicluster Motifs
Bicluster Genes
- Rv0270
- Rv0495c
- Rv0550c
- Rv0679c
- Rv0680c
- Rv0813c
- Rv0859
- Rv0898c
- Rv1042c
- Rv1149
- Rv1211
- Rv1217c
- Rv1451
- Rv1462
- Rv1464
- Rv1533
- Rv1827
- Rv1838c
- Rv1839c
- Rv1898
- Rv2110c
- Rv2280
- Rv2304c
- Rv2455c
- Rv2461c
- Rv2606c
- Rv3118
- Rv3221c
- Rv3583c
- Rv3853
Bicluster Conditions
- Strain.CDC1551..replicate.1
- Strain.CDC1551..replicate.2
- Strain.CDC1551..replicate.3
- Strain.CDC1551..replicate.4
- Strain.1006...replicate.2
- Strain.1006...replicate.4
- Strain.1254...replicate.4
- Strain.1254...replicate.2
- Strain.1254...replicate.3
- Strain.1254...replicate.1
- Strain.1843..replicate.1
- Strain.1843..replicate.4
- Strain.3160...replicate.3
- Strain.9700665..replicate.1
- Strain.9700665..replicate.2
- Strain.9700665..replicate.4
- Strain.9800608..replicate.1
- Strain.9800608..replicate.4
- Strain.9802501..replicate.3
- Strain.9802826..replicate.1
- Strain.9802826..replicate.3
- Strain.M3061a..replicate.4
- H37Rv.Vs.M.bovis.rep1
- H37Rv.Vs.M.bovis.rep2
- H37Rv.0.05..SDS.exposure.for.1h.rep.2
- H37Rv.0.05..SDS.exposure.for.1h.rep.5
- MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.3
- H37Rv.vs..H37Rv.SDS.treated.rep.3
- H37Rv.vs..H37Rv.SDS.treated.rep.5
- H37Rv.vs..H37Rv.SDS.treated.rep.6
- H37Rv.hypoxia.2hr.rep.2
- H37Rv.hypoxia.2hr.rep.3
- H37Rv.hypoxia.2hr.rep.4
- H37Rv.hypoxia.2hr.rep.6
- NRP.Day6..1
- NRP.Day6..3
- NRP.Day8..1
- NRP.Day8..2
- NRP.Day8..3
- NRP.Day10..1
- NRP.Day10..2
- NRP.Day10..3
- NRP.Day12..1
- NRP.Day12..2
- NRP.Day12..3
- NRP.Day14..1
- NRP.Day14..2
- NRP.Day14..3
- NRP.Day14..4
- NRP.Day14..6
- NRP.Day14..7
- NRP.Day14..8
- NRP.Day14..9
- NRP.Day20..1
- NRP.Day20..2
- H37Rv.hypoxia.4hr.rep.1
- H37Rv.hypoxia.4hr.rep.2
- H37Rv.hypoxia.4hr.rep.3
- H37Rv.hypoxia.4hr.rep.4
- H37Rv.hypoxia.4hr.rep.7
- H37Rv.hypoxia.12hr.rep.3
- H37Rv.hypoxia.1.day.rep.2
- H37Rv.hypoxia.1.day.rep.3
- H37Rv.hypoxia.4.day.rep.2
- H37Rv.hypoxia.4.day.rep.5
- H37Rv.hypoxia.4.day.rep.7
- H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
- H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
- H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
- H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
- Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
- Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
- Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
- Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
- Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
- Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
- Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
- Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
- Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
- Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
- Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.5
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.6
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
- MTB1254_SDS_90MIN_01
- MTB1254_SDS_90MIN_03
- SDS_3h_01
- SDS_60min_01
- Starvation_1254_OA50_3d_01
- Starvation_1254_OA50_3d_02
- Starvation_1254_OA50_3d_03
- Starvation_1254_OA50_3d_04
- Starvation_1254_OA50_5d_01
- Starvation_1254_OA50_5d_02
- Starvation_1254_OA50_5d_04
- Starvation_1254_OA50_6h_02
- Starvation_1254_PA50_24h_03
- Starvation_1254_PA50_24h_04
- Starvation_OA50_24h_02
- Starvation_OA50_24h_03
- CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.3
- Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
- H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.1
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.2
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.4
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.5
- BCG.2hr.phagosomal.profile
- BCG.24hr.phagosomal.profile
- M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
- M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
- MTB.in.Wild.type.macrophages.for.48hrs
- MTB.in.Wild.type.macrophages...IFNg.for.24hrs
- Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
- Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
- Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
- Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
- Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
- Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
- Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
- Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
- Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
- Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
- Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
- Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
- Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
- Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
- SG2.B0_N02A09c3
- SG6.H0_N5A03cy.5
- SG6_A0_N7A10cy.3
- SG6_B0_N7A10cy.5
- SG7.CT0_N11A03cy.5
- SG8.D.Day.0.pre_N27A10cy.3
- SG8.C.Day.0.post_N37A10cy.5
- SG8.D.Day.0.post_N27A11cy.3
- SG8.C.Day.1_N27A09cy.3
- SG8.B.Day.1_N37A05cy.5
- SG8.A.Day.1_fix_N37A03cy.5
- SG7.BT1_N11A06cy.5
- SG7.AT1_N11A05cy.5
- SG6_A1_N7A11cy.3
- SG6.D1_N5A05cy.5
- SG6.C1_N5A04cy.5
- SG2.B1_N02A10c3
- SG8.A.Day.2_N37A08cy.3
- SG8.C.Day.2_N37A12cy.5
- SG8.B.Day.2_N37A06cy.5
- SG2.B2_N02A11c3
- SG8.A.Day.3_N37A09cy.3
- SG8.B.Day.3_N37A07cy.5
- SG2.A3_N02A04c3
- SG2.B3_N02A12c3
- SG2.D3_N02A04c5
- SG8.A.Day.5_N37A10cy.3
- SG8.B.Day.5_N37A08cy.5
- SG2.B5_N02A09c5
- SG2.D5_N02A05c5
- SG2.D7_N02A06c5
- SG2.B7_N02A10c5
- SG6_B7_N7A12cy.5
- SG7.T7C_N11A10cy.5
- SG7.T7D_N11A11cy.5
- SG8.B.Day.7_N37A09cy.5
- SG.ISB.3.7A_N30A02cy.5
- SG12.B2_N32A11cy.3
- SG12.B6_N32A01cy.5
- SG12.A8_N32A06cy.3
- SG12.B8_N32A02cy.5
- SG12.C8_N32A10cy.5
- SG12.C24_N32A11cy.5
- SG12.A24_N32A07cy.3
- SG6.C8_N5A08cy.5
- SG6.B8_N5A07cy.5
- SG6.A8_N5A06cy.5
- SG.ISB.3.8A_N30A04cy.5
- SG6.D11_N8A09cy.5
- SG6.A11_N5A10cy.5
- SG.ISB.3.12B_N30A07cy.3
- SG.ISB.3.12D_N30A08cy.3
- SG6.A14_N8A10cy.5
- SG6.B14_N8A11cy.5
- SG6.C14_N8A12cy.5
- WT_140mM_NaCl_Rep1
- WT_140mM_NaCl_Rep3
- hip.mutant.KL2801..biological.rep2
- hip.mutant.KL2825..biological.rep1
- hip.mutant.KL2849..biological.rep1
- hip.mutant.HTS1090..biological.rep1
- hip.mutant.HTS1090..biological.rep2
- hip.mutant.HTS1105..biological.rep1
- hip.mutant.HTS1105..biological.rep2
- hip.mutant.HT1116..biological.rep1
- hip.mutant.HT1116..biological.rep2
- hip.mutant.HT1117..biological.rep1
- hip.mutant.HT1117..biological.rep2
- hip.mutant.HT1120..biological.rep1
- hip.mutant.HT1130..biological.rep1
- hip.mutant.HT1137..biological.rep1
- hip.mutant.HT1170..biological.rep1
- hip.mutant.HT1170..biological.rep2
- MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.2
- X0.1mMGSNO.10ug.mLmdvsDMSO.6h
- X0.1mMGSNO.20ug.mLCPZvsDMSO.6h
- X0.1mMGSNO.20ug.mLCPZvsDMSO.6hA
- X25ug.mLCPZ.0.1mMGSNO.DMSO..1
- X25ug.mLCPZ.0.1mMGSNO.DMSO..2
- X25ug.mLCPZ.0.1mMGSNO.DMSO..3
- X25ug.mLCPZ.0.1mMGSNOvsDMSO.A
- X5ug.mL.CFZ.0.1mM.GSNO.DMSO..1
- X5ug.mLCFZ.0.1mMGSNOvsDMSO.A
- X10ug.mL.EconazolevsEtOH..6hA
- X24ug.mL.Econazole.DMSO..6h..1
- X13ug.mL.clfzine.DMSO..6h..2
- X10ug.mLchlorpromazinevsctrl.6hA
- X20ug.mL.chlorprmz.DMSO..6h..2
- X20ug.mL.CPZvsDMSO..6h.A
- X25ug.mL.CPZvsDMSO..6h.A
- X25ug.mL.CPZvsDMSO..6h.B
- X24ug.mL.cltrmazole.DMS..6h..1
- X24ug.mL.cltrmazole.DMS..6h..3
- X50uM.CCCP.DMSO..6h..1
- X50uM.CCCPvsDMSO..6h
- X1mM.DNP.DMSO..6h..1
- X1mM.DNP.DMSO..6h..2
- X2.5mM.Dinitrophenol.DMSO..6h
- X20uM.DCCD.DMSO..6h..2
- X2mM.DTTvsDMSO..6h
- X2mM.DTTvsDMSO..6h.A
- X5ug.mL.KCN.DMSO..6h..2
- X10ug.mL.menadionevsDMSO..6h
- X10ug.mLmdn.0.1mMGSNO.DMSO..2
- X10ug.mL.TRZ.DMSO..6h..2
- X50ug.mL.Thioridazine.DMSO..6h
- CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.1
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.1
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.2
- CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.2
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.1
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.2