( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_pssms/552fbc4db744335b89d87a3d): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 74 | ||||
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Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1140 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1166 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.1786 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.1787 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.1787 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.1787 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.1794 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.1796 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.1796 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.1805 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.1806 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 1.3598 | 7749520 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 1.3599 | 7749520 | bicluster_motifs_shortcode( ) | .../shortcodes.php:433 |
16 | 1.3600 | 7749648 | file_get_contents ( ) | .../short_codes.php:74 |
( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_genes/552fbc4db744335b89d87a3d): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 15 | ||||
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Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1140 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1166 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.1786 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.1787 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.1787 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.1787 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.1794 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.1796 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.1796 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.1805 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.1806 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 2.5540 | 7751560 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 2.5541 | 7752032 | bicluster_genes_shortcode( ) | .../shortcodes.php:433 |
16 | 2.5541 | 7752536 | file_get_contents ( ) | .../short_codes.php:15 |
( ! ) Notice: Trying to get property 'genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 16 | ||||
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Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1140 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1166 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.1786 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.1787 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.1787 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.1787 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.1794 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.1796 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.1796 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.1805 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.1806 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 2.5540 | 7751560 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 2.5541 | 7752032 | bicluster_genes_shortcode( ) | .../shortcodes.php:433 |
( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 18 | ||||
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Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1140 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1166 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.1786 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.1787 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.1787 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.1787 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.1794 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.1796 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.1796 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.1805 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.1806 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 2.5540 | 7751560 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 2.5541 | 7752032 | bicluster_genes_shortcode( ) | .../shortcodes.php:433 |
( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 29 | ||||
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Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1140 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1166 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.1786 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.1787 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.1787 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.1787 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.1794 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.1796 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.1796 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.1805 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.1806 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 2.5540 | 7751560 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 2.5541 | 7752032 | bicluster_genes_shortcode( ) | .../shortcodes.php:433 |
ID: 552fbc4db744335b89d87a3d
# Conditions: 241
# Genes: 5
Residual: 0.44197020876948
# Conditions: 241
# Genes: 5
Residual: 0.44197020876948
Bicluster Motifs
Bicluster Genes
Bicluster Conditions
- H37Rv..7H9.roll.replicate.1.x
- H37Rv..7H9.roll.replicate.2.x
- H37Rv..7H9.roll.replicate.4.x
- H37Rv..7H9.shake.replicate.2
- H37Rv..Dubos.media.replicate.2
- H37Rv..Dubos.media.replicate.4
- H37Rv..Sauton.s.media.replicate.2
- H37Rv..Sauton.s.media.replicate.3
- H37Rv..Youman.media.replicate.1
- H37Rv..Youman.media.replicate.2
- H37Rv..Youman.media.replicate.3
- Strain.CDC1551..replicate.1
- Strain.CDC1551..replicate.3
- Strain.1006...replicate.1
- Strain.1006...replicate.2
- Strain.1006...replicate.4
- Strain.1254...replicate.4
- Strain.1254...replicate.2
- Strain.1843..replicate.1
- Strain.1843...replicate.2
- Strain.1843..replicate.4
- Strain.3160..replicate.1
- Strain.3160..replicate.2
- Strain.3160..replicate.4
- Strain.9700665..replicate.1
- Strain.9700665..replicate.3
- Strain.9700665..replicate.4
- Strain.9800608..replicate.2
- Strain.9802501..replicate.2
- Strain.9802501..replicate.3
- Strain.9802826..replicate.1
- Strain.M3061a..replicate.1
- Strain.M3061a..replicate.2
- H37Rv.Day.0.rep.1
- H37Rv.Vs.M.bovis.rep2
- H37Rv.Vs.M.bovis.rep3
- MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.3
- MTB1254.Day.0.rep.1
- MTB1254.Day.0.rep.3
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.1
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.2
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.3
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.4
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.5
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.6
- MTB1254.vs..MTB1254.rep3
- MTB1254.vs..MTB1254.rep4
- MTB1254.vs..MTB1254.rep6
- H37Rv.0.2..Oxygen..2h..1
- H37Rv.0.2..Oxygen..2h..2
- H37Rv.0.2..Oxygen..2h..3
- H37Rv.0.2..Oxygen..2h..4
- H37Rv.0.2..Oxygen..2h..5
- H37Rv.Day6.2
- H37Rv.Day6.3
- H37Rv.Day8.2
- H37Rv.Day8.3
- H37Rv.Day14.1
- H37Rv.Day24.3
- H37Rv.Day60.1
- H37Rv.Day60.2
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.3
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.4
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.5
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.6
- WT.t.6h.WT.t.0h..1
- WT.t.6h.WT.t.0h..2
- WT.t.0h.WT.t.6h..2
- H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
- H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
- Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
- Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
- Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
- Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
- Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
- H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2
- H37Rv.wild.type.Vs.H37Rv.wild.type.rep.5
- H37Rv.wild.type.Vs.H37Rv.wild.type.rep.6
- Whole.Lung.Surfactant.2hrs.rep.1
- Whole.Lung.Surfactant.2hrs.rep.2
- Whole.Lung.Surfactant.2hrs.rep.3
- Whole.Lung.Surfactant.30min.rep.1
- Whole.Lung.Surfactant.30min.rep.4
- Whole.Lung.Surfactant.30min.rep.5
- Extracted.Lung.Surfactant.2hrs.rep.1
- Extracted.Lung.Surfactant.2hrs.rep.2
- Extracted.Lung.Surfactant.30min.rep.1
- Extracted.Lung.Surfactant.30min.rep.3
- Extracted.Lung.Surfactant.30min.rep.4
- Purified.Surfactant.Lipids.30min.rep.1
- Purified.Surfactant.Lipids.30min.rep.2
- Purified.Human.SP.A.Coated.2hrs.rep2
- Purified.Human.SP.A.Uncoated.2hrs.rep4
- AA_30uM_10.min_07
- AA_30uM_1h_02
- AA_30uM_1h_05
- AA_30uM_1h_06
- AA_30uM_24h_02
- AA_30uM_2h_02
- AA_30uM_2h_05
- AA_30uM_2h_07
- AA_30uM_30min_02
- AA_30uM_30min_07
- AA_30uM_30min_09
- AA_30uM_4h_03
- L2A_30uM_10min_03
- L2A_30uM_10min_04
- L2A_30uM_10min_07
- L2A_30uM_1h_04
- L2A_30uM_1h_06
- L2A_30uM_1h_08
- L2A_30uM_2h_01
- L2A_30uM_2h_02
- L2A_30uM_30min_02
- L2A_30uM_30min_05
- L2A_30uM_30Min_06
- LAA_50uM_10min_01
- LAA_50uM_10min_02
- OA_50uM_10min_08
- OA_50uM_1h_01
- OA_50uM_1h_05
- OA_50uM_1h_06
- OA_50uM_1h_08
- OA_50uM_1h_09
- OA_50uM_2h_02
- OA_50uM_2h_03
- OA_50uM_2h_05
- OA_50uM_2h_07
- OA_50uM_2h_08
- OA_50uM_2h_10
- OA_50uM_30min_04
- OA_50uM_30min_06
- OA_50uM_30min_07
- OA_50uM_30min_08
- OA_50uM_30min_09
- OA_50uM_4h_03
- OA_50uM_4h_06
- OA_50uM_4h_07
- OA_50uM_4h_08
- OA_50uM_4h_09
- PA_100uM_2h_03
- PA_5.uM_10min_02
- PA_50uM_10.min_02
- PA_50uM_10.min_03
- PA_50uM_10min_01
- PA_50uM_10min_04
- PA_50uM_10min_06
- PA_50uM_10min_07
- PA_50uM_12h_01
- PA_50uM_1h_01
- PA_50uM_1h_04
- PA_50uM_1h_05
- PA_50uM_1h_08
- PA_50uM_1h_11
- PA_50uM_24h_03
- PA_50uM_24h_04
- PA_50uM_24h_06
- PA_50uM_24h_07
- PA_50uM_24h_08
- PA_50uM_24h_10
- PA_50uM_2h_01
- PA_50uM_2h_02
- PA_50uM_2h_03
- PA_50uM_2h_04
- PA_50uM_2h_07
- PA_50uM_2h_08
- PA_50uM_30.min_04
- PA_50uM_30.min_06
- PA_50uM_30min_01
- PA_50uM_30min_11
- PA_50uM_3d_01
- PA_50uM_3d_05
- PA_50uM_4h_02
- PA_50uM_4h_07
- PA_50uM_8h_01
- PA_50uM_8h_05
- PA_50uM_8h_06
- PA_5uM_10.min_01
- CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.2
- CDC1551.Ctrl.vs.H37Rv.rep.1
- CDC1551.Ctrl.vs.H37Rv.rep.2
- CDC1551.Ctrl.vs.H37Rv.rep.3
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.1
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.2
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.5
- WT.TB.rep3
- SS_A1_RV.3
- WT_140mM_NaCl_Rep1
- WT_140mM_NaCl_Rep2
- WT_140mM_NaCl_Rep3
- WT_140mM_NaCl_Rep4
- wild.type..mc.2.6020...biological.rep2
- hip.mutant.KL2849..biological.rep1
- hip.mutant.HTS1090..biological.rep1
- hip.mutant.HTS1105..biological.rep1
- hip.mutant.HT1116..biological.rep1
- hip.mutant.HT1116..biological.rep2
- hip.mutant.HT1117..biological.rep1
- hip.mutant.HT1117..biological.rep2
- hip.mutant.HT1120..biological.rep2
- hip.mutant.HT1130..biological.rep1
- hip.mutant.HT1130..biological.rep2
- hip.mutant.HT1134..biological.rep1
- hip.mutant.HT1134..biological.rep2
- hip.mutant.HT1137..biological.rep1
- hip.mutant.HT1137..biological.rep2
- hip.mutant.HT1170..biological.rep1
- hip.mutant.HT1170..biological.rep2