| ( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_genes/552fbab2b744335b89d86fe7): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 15 | ||||
|---|---|---|---|---|
| Call Stack | ||||
| # | Time | Memory | Function | Location |
| 1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
| 2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
| 3 | 0.1116 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
| 4 | 0.1142 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
| 5 | 0.1755 | 7718136 | get_template_part( ) | .../page.php:28 |
| 6 | 0.1755 | 7718712 | locate_template( ) | .../general-template.php:206 |
| 7 | 0.1755 | 7718840 | load_template( ) | .../template.php:720 |
| 8 | 0.1756 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
| 9 | 0.1763 | 7736328 | the_content( ) | .../content-page.php:22 |
| 10 | 0.1765 | 7736576 | apply_filters( ) | .../post-template.php:256 |
| 11 | 0.1765 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
| 12 | 0.1774 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
| 13 | 0.1775 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
| 14 | 1.0174 | 7757480 | do_shortcode_tag( ) | .../shortcodes.php:273 |
| 15 | 1.0174 | 7757952 | bicluster_genes_shortcode( ) | .../shortcodes.php:433 |
| 16 | 1.0175 | 7758456 | file_get_contents ( ) | .../short_codes.php:15 |
| ( ! ) Notice: Trying to get property 'genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 16 | ||||
|---|---|---|---|---|
| Call Stack | ||||
| # | Time | Memory | Function | Location |
| 1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
| 2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
| 3 | 0.1116 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
| 4 | 0.1142 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
| 5 | 0.1755 | 7718136 | get_template_part( ) | .../page.php:28 |
| 6 | 0.1755 | 7718712 | locate_template( ) | .../general-template.php:206 |
| 7 | 0.1755 | 7718840 | load_template( ) | .../template.php:720 |
| 8 | 0.1756 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
| 9 | 0.1763 | 7736328 | the_content( ) | .../content-page.php:22 |
| 10 | 0.1765 | 7736576 | apply_filters( ) | .../post-template.php:256 |
| 11 | 0.1765 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
| 12 | 0.1774 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
| 13 | 0.1775 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
| 14 | 1.0174 | 7757480 | do_shortcode_tag( ) | .../shortcodes.php:273 |
| 15 | 1.0174 | 7757952 | bicluster_genes_shortcode( ) | .../shortcodes.php:433 |
| ( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 18 | ||||
|---|---|---|---|---|
| Call Stack | ||||
| # | Time | Memory | Function | Location |
| 1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
| 2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
| 3 | 0.1116 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
| 4 | 0.1142 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
| 5 | 0.1755 | 7718136 | get_template_part( ) | .../page.php:28 |
| 6 | 0.1755 | 7718712 | locate_template( ) | .../general-template.php:206 |
| 7 | 0.1755 | 7718840 | load_template( ) | .../template.php:720 |
| 8 | 0.1756 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
| 9 | 0.1763 | 7736328 | the_content( ) | .../content-page.php:22 |
| 10 | 0.1765 | 7736576 | apply_filters( ) | .../post-template.php:256 |
| 11 | 0.1765 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
| 12 | 0.1774 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
| 13 | 0.1775 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
| 14 | 1.0174 | 7757480 | do_shortcode_tag( ) | .../shortcodes.php:273 |
| 15 | 1.0174 | 7757952 | bicluster_genes_shortcode( ) | .../shortcodes.php:433 |
| ( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 29 | ||||
|---|---|---|---|---|
| Call Stack | ||||
| # | Time | Memory | Function | Location |
| 1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
| 2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
| 3 | 0.1116 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
| 4 | 0.1142 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
| 5 | 0.1755 | 7718136 | get_template_part( ) | .../page.php:28 |
| 6 | 0.1755 | 7718712 | locate_template( ) | .../general-template.php:206 |
| 7 | 0.1755 | 7718840 | load_template( ) | .../template.php:720 |
| 8 | 0.1756 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
| 9 | 0.1763 | 7736328 | the_content( ) | .../content-page.php:22 |
| 10 | 0.1765 | 7736576 | apply_filters( ) | .../post-template.php:256 |
| 11 | 0.1765 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
| 12 | 0.1774 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
| 13 | 0.1775 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
| 14 | 1.0174 | 7757480 | do_shortcode_tag( ) | .../shortcodes.php:273 |
| 15 | 1.0174 | 7757952 | bicluster_genes_shortcode( ) | .../shortcodes.php:433 |
ID: 552fbab2b744335b89d86fe7
# Conditions: 114
# Genes: 12
Residual: 0.44730391340056
# Conditions: 114
# Genes: 12
Residual: 0.44730391340056
Bicluster Motifs
Bicluster Genes
Bicluster Conditions
- Strain.1006...replicate.2
- Strain.1006...replicate.3
- Strain.1006...replicate.4
- Strain.1254...replicate.1
- Strain.1843..replicate.1
- Strain.1843...replicate.2
- Strain.3160..replicate.2
- Strain.9700665..replicate.2
- Strain.9802501..replicate1
- Strain.9802501..replicate.2
- Strain.9802826..replicate.1
- Strain.9802826..replicate.2
- Strain.M3061a..replicate.1
- H37Rv.Vs.M.bovis.rep3
- High.iron.wt.vs.low.iron.wt.1a
- High.iron.wt.vs.low.iron.wt.3b
- PBS.Tween.7H9
- H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
- H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
- H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
- H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
- H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
- Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
- Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
- Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
- Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
- Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
- Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
- Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
- Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
- H37Rv.wild.type.Vs.H37Rv.wild.type.rep.1
- H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2
- H37Rv.wild.type.Vs.H37Rv.wild.type.rep.3
- H37Rv.wild.type.Vs.H37Rv.wild.type.rep.4
- H37Rv.wild.type.Vs.H37Rv.wild.type.rep.5
- H37Rv.wild.type.Vs.H37Rv.wild.type.rep.6
- Glucose_5mM_10min_01
- Glycerol_1.
- Glycerol_1._10M_01
- CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.3
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.1
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.2
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.4
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.1
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.4
- hip.mutant.KL2825..biological.rep1
- hip.mutant.HTS1090..biological.rep1
- hip.mutant.HTS1090..biological.rep2
- hip.mutant.HTS1105..biological.rep1
- hip.mutant.HTS1105..biological.rep2
- hip.mutant.HT1116..biological.rep2
- hip.mutant.HT1117..biological.rep1
- hip.mutant.HT1117..biological.rep2
- hip.mutant.HT1170..biological.rep1
- hip.mutant.HT1170..biological.rep2
- X20ug.mL.Prcp.6776.DMSO..6h..1
- X20ug.mL.Procept.6776vsDMSO..6h
- X20ug.mL.Procept6776vsDMSO..6h
- X5ug.mLProcept.6778vsDMSO.6h
- X5ug.mLProcept.6778vsDMSO.6hA
- X20ug.mL.Prcp.6778.DMSO..6h..1
- X20ug.mLProcept6778vsDMSO.6h
- X40ug.mLProcept6778vsDMSO.6h
- X40ug.mLProcept6778vsDMSO.6hA
- X10ug.mL.PA.1vsDMSO..6hA
- X10ug.mL.PA.1vsDMSO..6hB
- X50ug.mL.PA.1vsDMSO..6h
- X10ug.mL.PA.21vsDMSO..6h
- X10ug.mL.PA.21vsDMSO..6hA
- X50ug.mL.PA.21vsDMSO..6h
- X0.2ug.mL.PA824.DMSO..6h..1
- X0.4ug.mL.PA824.DMSO..6h..1
- X0.4ug.mL.PA824.DMSO..6h..2
- X0.4ug.mL.PA824.DMSO..6h..3
- X0.4ug.mL.PA824.DMSO..6h..4
- X2ug.mL.PA824.DMSO..6h..1
- X2ug.mL.PA824.DMSO..6h..2
- X25ug.mL.AntimycinvsDMSO..6h
- X50ug.mLAntimycinAvsDMSO..6hA
- X1mM.DTNBvsDMSO..6h
- X2mM.DTNBvsDMSO
- X10ug.mL.methoxatinvsDMSO..6h.A
- X10ug.mLMethoxatinvsDMSO.6h
- X2mMb.mercaptoethanolvsDMSO.6h
- X50ug.mL.VerapamilvsDMSO..6h
- X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1
- X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.1
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.x
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4
- X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.x
- X2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.y
- X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.y
- MTB.at.T0..biological.rep4
- MTB.at.T60..biological.rep2
- MTB.at.T180..biological.rep1
- MTB.at.T180..biological.rep2
- MTB.at.T180..biological.rep3
- MTB.at.T180..biological.rep4
- MTB.at.T360..biological.rep1