Bicluster


( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_info/552fb939b744335b89d865f4): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 666
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19677193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20127197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.31007718136get_template_part( ).../page.php:28
60.31017718712locate_template( ).../general-template.php:206
70.31017718840load_template( ).../template.php:720
80.31017719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.31137736328the_content( ).../content-page.php:22
100.31167736576apply_filters( ).../post-template.php:256
110.31167736976WP_Hook->apply_filters( ).../plugin.php:205
120.31317742504do_shortcode( ).../class-wp-hook.php:310
130.31337748560preg_replace_callback ( ).../shortcodes.php:273
140.31337749184do_shortcode_tag( ).../shortcodes.php:273
150.31337749184bicluster_info_shortcode( ).../shortcodes.php:433
160.31347749384file_get_contents ( ).../short_codes.php:666

( ! ) Notice: Trying to get property 'bicluster' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 667
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19677193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20127197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.31007718136get_template_part( ).../page.php:28
60.31017718712locate_template( ).../general-template.php:206
70.31017718840load_template( ).../template.php:720
80.31017719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.31137736328the_content( ).../content-page.php:22
100.31167736576apply_filters( ).../post-template.php:256
110.31167736976WP_Hook->apply_filters( ).../plugin.php:205
120.31317742504do_shortcode( ).../class-wp-hook.php:310
130.31337748560preg_replace_callback ( ).../shortcodes.php:273
140.31337749184do_shortcode_tag( ).../shortcodes.php:273
150.31337749184bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'id' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 669
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19677193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20127197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.31007718136get_template_part( ).../page.php:28
60.31017718712locate_template( ).../general-template.php:206
70.31017718840load_template( ).../template.php:720
80.31017719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.31137736328the_content( ).../content-page.php:22
100.31167736576apply_filters( ).../post-template.php:256
110.31167736976WP_Hook->apply_filters( ).../plugin.php:205
120.31317742504do_shortcode( ).../class-wp-hook.php:310
130.31337748560preg_replace_callback ( ).../shortcodes.php:273
140.31337749184do_shortcode_tag( ).../shortcodes.php:273
150.31337749184bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'num_conditions' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 670
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19677193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20127197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.31007718136get_template_part( ).../page.php:28
60.31017718712locate_template( ).../general-template.php:206
70.31017718840load_template( ).../template.php:720
80.31017719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.31137736328the_content( ).../content-page.php:22
100.31167736576apply_filters( ).../post-template.php:256
110.31167736976WP_Hook->apply_filters( ).../plugin.php:205
120.31317742504do_shortcode( ).../class-wp-hook.php:310
130.31337748560preg_replace_callback ( ).../shortcodes.php:273
140.31337749184do_shortcode_tag( ).../shortcodes.php:273
150.31337749184bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'num_genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 671
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19677193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20127197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.31007718136get_template_part( ).../page.php:28
60.31017718712locate_template( ).../general-template.php:206
70.31017718840load_template( ).../template.php:720
80.31017719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.31137736328the_content( ).../content-page.php:22
100.31167736576apply_filters( ).../post-template.php:256
110.31167736976WP_Hook->apply_filters( ).../plugin.php:205
120.31317742504do_shortcode( ).../class-wp-hook.php:310
130.31337748560preg_replace_callback ( ).../shortcodes.php:273
140.31337749184do_shortcode_tag( ).../shortcodes.php:273
150.31337749184bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'residual' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 672
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19677193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20127197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.31007718136get_template_part( ).../page.php:28
60.31017718712locate_template( ).../general-template.php:206
70.31017718840load_template( ).../template.php:720
80.31017719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.31137736328the_content( ).../content-page.php:22
100.31167736576apply_filters( ).../post-template.php:256
110.31167736976WP_Hook->apply_filters( ).../plugin.php:205
120.31317742504do_shortcode( ).../class-wp-hook.php:310
130.31337748560preg_replace_callback ( ).../shortcodes.php:273
140.31337749184do_shortcode_tag( ).../shortcodes.php:273
150.31337749184bicluster_info_shortcode( ).../shortcodes.php:433
ID:
# Conditions:
# Genes:
Residual:

Bicluster Motifs

Bicluster Genes

  • Rv0030
  • Rv1054
  • Rv1231c
  • Rv1302
  • Rv2722

Bicluster Conditions

  • H37Rv..7H9.shake.replicate.1
  • H37Rv..7H9.shake.replicate.3
  • H37Rv..7H9.shake.replicate.4
  • H37Rv..Dubos.media.replicate.1
  • H37Rv..Sauton.s.media.replicate.1
  • H37Rv..Sauton.s.media.replicate.2
  • H37Rv..Youman.media.replicate.4
  • H37Rv..7H9.roll.replicate.4.y
  • Strain.CDC1551..replicate.1
  • Strain.1006...replicate.1
  • Strain.1006...replicate.3
  • Strain.1006...replicate.4
  • Strain.1254...replicate.4
  • Strain.1254...replicate.2
  • Strain.1254...replicate.3
  • Strain.1254...replicate.1
  • Strain.1843..replicate.1
  • Strain.1843...replicate.2
  • Strain.1843..replicate.4
  • Strain.3160..replicate.1
  • Strain.3160..replicate.2
  • Strain.3160..replicate.4
  • Strain.9700665..replicate.1
  • Strain.9700665..replicate.2
  • Strain.9700665..replicate.4
  • Strain.9800608..replicate.1
  • Strain.9800608...replicate.3
  • Strain.9800608..replicate.4
  • Strain.9802501..replicate.2
  • Strain.9802501..replicate.3
  • Strain.9802826..replicate.1
  • Strain.9802826..replicate.2
  • Strain.9802826..replicate.3
  • Strain.M3061a..replicate.2
  • Strain.M3061a..replicate.4
  • H37Rv.Vs.M.bovis.rep1
  • H37Rv.Vs.M.bovis.rep2
  • H37Rv.Vs.M.bovis.rep3
  • H37Rv.Vs.M.bovis.rep4
  • MTB.strain.1254.Ctrl.vs.high.aeration.rep1
  • MTB1254.Day.0.rep.1
  • MTB1254.Day.0.rep.3
  • H37Rv.Day.0.rep.2
  • H37Rv.Day.0.rep.3
  • H37Rv.Day14.2
  • WT.t.6h.WT.t.0h..2
  • PBS.Tween.7H9
  • PBS.Tw.DMSOvs7H9..6h
  • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
  • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
  • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
  • H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
  • H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
  • Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
  • Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
  • Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
  • Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
  • Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
  • Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
  • Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
  • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.3
  • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.4
  • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.5
  • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.6
  • Glucose_5mM_10min_01
  • Glycerol_1._10M_01
  • CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.1
  • CDC1551.Ctrl.vs.H37Rv.rep.3
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.4
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3
  • CDC1551.ctrl.vs.ctrl.at.0.hr.rep.1
  • CDC1551.ctrl.vs.ctrl.at.0.hr.rep.2
  • H37Rv.reaeration.for.1hrs.rep.5
  • H37Rv.reaeration.for.1hrs.rep.6
  • H37Rv.reaeration.for.1hrs.rep.8
  • H37Rv.reaeration.for.4hrs.rep.1
  • H37Rv.reaeration.for.4hrs.rep.4
  • H37Rv.reaeration.for.4hrs.rep.5
  • H37Rv.reaeration.for.4hrs.rep.6
  • H37Rv.reaeration.for.4hrs.rep.7
  • H37Rv.reaeration.for.4hrs.rep.8
  • H37Rv.reaeration.for.6hrs.rep.1
  • H37Rv.reaeration.for.6hrs.rep.3
  • H37Rv.reaeration.for.6hrs.rep.5
  • H37Rv.reaeration.for.12hrs.rep.1
  • H37Rv.reaeration.for.12hrs.rep.3
  • H37Rv.reaeration.for.12hrs.rep.5
  • H37Rv.reaeration.for.12hrs.rep.6
  • H37Rv.reaeration.for.24hrs.rep.1
  • H37Rv.reaeration.for.24hrs.rep.2
  • H37Rv.reaeration.for.24hrs.rep.4
  • wild.type..mc.2.6020...biological.rep2
  • hip.mutant.KL2801..biological.rep1
  • hip.mutant.KL2825..biological.rep2
  • hip.mutant.KL2849..biological.rep1
  • hip.mutant.HT1116..biological.rep2
  • hip.mutant.HT1117..biological.rep1
  • hip.mutant.HT1120..biological.rep2
  • hip.mutant.HT1130..biological.rep1
  • hip.mutant.HT1137..biological.rep1
  • hip.mutant.HT1170..biological.rep1
  • hip.mutant.HT1170..biological.rep2