Bicluster


( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_genes/552fb83fb744335b89d860a9): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 15
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.10697193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.10947197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.16787718136get_template_part( ).../page.php:28
60.16787718712locate_template( ).../general-template.php:206
70.16787718840load_template( ).../template.php:720
80.16797719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.16867736328the_content( ).../content-page.php:22
100.16877736576apply_filters( ).../post-template.php:256
110.16877736976WP_Hook->apply_filters( ).../plugin.php:205
120.16967742504do_shortcode( ).../class-wp-hook.php:310
130.16967748560preg_replace_callback ( ).../shortcodes.php:273
141.21597757480do_shortcode_tag( ).../shortcodes.php:273
151.21597757952bicluster_genes_shortcode( ).../shortcodes.php:433
161.21607758456file_get_contents ( ).../short_codes.php:15

( ! ) Notice: Trying to get property 'genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 16
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.10697193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.10947197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.16787718136get_template_part( ).../page.php:28
60.16787718712locate_template( ).../general-template.php:206
70.16787718840load_template( ).../template.php:720
80.16797719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.16867736328the_content( ).../content-page.php:22
100.16877736576apply_filters( ).../post-template.php:256
110.16877736976WP_Hook->apply_filters( ).../plugin.php:205
120.16967742504do_shortcode( ).../class-wp-hook.php:310
130.16967748560preg_replace_callback ( ).../shortcodes.php:273
141.21597757480do_shortcode_tag( ).../shortcodes.php:273
151.21597757952bicluster_genes_shortcode( ).../shortcodes.php:433

( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 18
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.10697193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.10947197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.16787718136get_template_part( ).../page.php:28
60.16787718712locate_template( ).../general-template.php:206
70.16787718840load_template( ).../template.php:720
80.16797719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.16867736328the_content( ).../content-page.php:22
100.16877736576apply_filters( ).../post-template.php:256
110.16877736976WP_Hook->apply_filters( ).../plugin.php:205
120.16967742504do_shortcode( ).../class-wp-hook.php:310
130.16967748560preg_replace_callback ( ).../shortcodes.php:273
141.21597757480do_shortcode_tag( ).../shortcodes.php:273
151.21597757952bicluster_genes_shortcode( ).../shortcodes.php:433

( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 29
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.10697193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.10947197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.16787718136get_template_part( ).../page.php:28
60.16787718712locate_template( ).../general-template.php:206
70.16787718840load_template( ).../template.php:720
80.16797719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.16867736328the_content( ).../content-page.php:22
100.16877736576apply_filters( ).../post-template.php:256
110.16877736976WP_Hook->apply_filters( ).../plugin.php:205
120.16967742504do_shortcode( ).../class-wp-hook.php:310
130.16967748560preg_replace_callback ( ).../shortcodes.php:273
141.21597757480do_shortcode_tag( ).../shortcodes.php:273
151.21597757952bicluster_genes_shortcode( ).../shortcodes.php:433
ID: 552fb83fb744335b89d860a9
# Conditions: 161
# Genes: 17
Residual: 0.37175175560619

Bicluster Motifs

Bicluster Genes

    Bicluster Conditions

    • X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.x
    • X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.x
    • X20ug.ml.KCN.vs.DMSO.6hrs.x
    • MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.1
    • MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.2
    • MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.3
    • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.3
    • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.4
    • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1
    • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.2
    • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.3
    • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4
    • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.2
    • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.3
    • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.4
    • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.3
    • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.4
    • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.4
    • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.1
    • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.3
    • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.4
    • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1
    • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.2
    • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.3
    • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.4
    • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.1
    • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.2
    • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3
    • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.4
    • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.1
    • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.4
    • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.3
    • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.4
    • MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.1
    • MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.3
    • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.4
    • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2
    • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.3
    • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4
    • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.2
    • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.1
    • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.3
    • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.4
    • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.1
    • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.3
    • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.3
    • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.4
    • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.1
    • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.2
    • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.4
    • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.3
    • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.1
    • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.2
    • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.3
    • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.4
    • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.1
    • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.2
    • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.3
    • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.4
    • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.5
    • X20ug.mL.Procept.6776vsDMSO..6h
    • X20ug.mL.Procept6776vsDMSO..6h
    • X30ug.mLProcept6776vsDMSO.6h
    • X30ug.mLProcept6776vsDMSO.6hA
    • X5ug.mLProcept.6778vsDMSO.6h
    • X5ug.mLProcept.6778vsDMSO.6hA
    • X20ug.mL.Prcp.6778.DMSO..6h..2
    • X20ug.mLProcept6778vsDMSO.6h
    • X20ug.mLProcept6778vsDMSO.6hB
    • X40ug.mLProcept6778vsDMSO.6h
    • X40ug.mLProcept6778vsDMSO.6hA
    • X50ug.mL.PA.1vsDMSO..6h
    • X10ug.mL.PA.21vsDMSO..6hA
    • X50ug.mL.PA.21vsDMSO..6hA
    • X0.4ug.mL.PA824.DMSO..6h..3
    • X2ug.mL.PA824.DMSO..6h..1
    • X2ug.mL.PA824.DMSO..6h..2
    • X0.1mMGSNO.10ug.mLmdvsDMSO.6h
    • X0.1mMGSNO.10ug.mLmdvsDMSO.6hA
    • X0.1mMGSNO.20ug.mLCPZvsDMSO.6h
    • X0.1mMGSNO.20ug.mLCPZvsDMSO.6hA
    • X25ug.mLCPZ.0.1mMGSNO.DMSO..1
    • X25ug.mLCPZ.0.1mMGSNO.DMSO..2
    • X25ug.mLCPZ.0.1mMGSNO.DMSO..3
    • X25ug.mLCPZ.0.1mMGSNOvsDMSO.A
    • X0.1mMGSNO.5ug.mLKCNvsDMSO.6h
    • X10ug.mL.EconazolevsEtOH..6h
    • X10ug.mL.EconazolevsEtOH..6hA
    • X24ug.mL.Econazole.DMSO..6h..1
    • X24ug.mL.Econazole.DMSO..6h..2
    • X12.5ug.mL.AntimycinvsDMSO..6h
    • X25ug.mL.AntimycinvsDMSO..6h
    • X50ug.mLAntimycinAvsDMSO..6hB
    • X10ug.mL.clofazimine.DMSO..6h
    • X13ug.mL.clfzine.DMSO..6h..1
    • X10ug.mLchlorpromazinevsctrl.6h
    • X10ug.mLchlorpromazinevsctrl.6hA
    • X20ug.mL.chlorprmz.DMSO..6h..1
    • X20ug.mL.CPZvsDMSO..6h.A
    • X25ug.mL.CPZvsDMSO..6h.A
    • X60ug.mL.ChlorprovsEtOH..6h
    • X10ug.mL.ClotrimvsEtOH..6hA
    • X10ug.mL.clotrimvsEtOH..6h
    • X24ug.mL.cltrmazole.DMS..6h..1
    • X24ug.mL.cltrmazole.DMS..6h..3
    • X10uM.CCCP.DMSO..6h
    • X0.5mM.DNP.DMSO..6h
    • X1mM.DNP.DMSO..6h..1
    • X1mM.DNP.DMSO..6h..2
    • X2.5mM.Dinitrophenol.DMSO..6h
    • X20uM.DCCD.DMSO..6h..1
    • X20uM.DCCD.DMSO..6h..2
    • X100uM.DCCD.DMSO..6h
    • X1mM.DTNBvsDMSO..6h
    • X2mM.DTTvsDMSO..6h
    • X2mM.DTTvsDMSO..6h.A
    • X20ug.mL.KCN.DMSO..6h
    • X10ug.mL.menadionevsDMSO..6h
    • X10ug.mLmnd.Dubos.vsDMSO.6h
    • X2ug.mL.SMvsEtOH..6h
    • X2ug.mL.SMvsEtOH..6hA
    • X10ug.mL.TRZ.DMSO..6h..1
    • X50ug.mL.Thioridazine.DMSO..6h
    • X1uM.ValinomycinvsDMSO..6h
    • X1uM.ValinomycinvsDMSO..6h.B
    • X10uM.ValinomycinvsDMSO..6h
    • X0.5uMValinomycin.70mMKClvsDMSO.6h
    • X2mM.ZnSO4.DMSO..6h
    • X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
    • X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.x
    • X2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
    • Tet_50ng_30M_01
    • Tet_5ug_30M_01
    • X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.y
    • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1
    • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.1
    • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.2
    • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.1
    • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.2
    • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1
    • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.2
    • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1
    • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.2
    • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.1
    • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.2
    • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.1
    • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.2
    • MTB.at.T0..biological.rep1
    • MTB.at.T0..biological.rep2
    • MTB.at.T0..biological.rep3
    • MTB.at.T30..biological.rep1
    • MTB.at.T30..biological.rep2
    • MTB.at.T30..biological.rep3
    • MTB.at.T60..biological.rep2
    • MTB.at.T180..biological.rep1
    • MTB.at.T180..biological.rep2
    • MTB.at.T180..biological.rep3
    • MTB.at.T180..biological.rep4
    • MTB.at.T360..biological.rep1
    • MTB.at.T360..biological.rep3
    • MTB.at.T360..biological.rep4