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|---|---|---|---|---|
| Call Stack | ||||
| # | Time | Memory | Function | Location |
| 1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
| 2 | 0.0001 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
| 3 | 0.4387 | 7193712 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
| 4 | 0.4434 | 7197456 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
| 5 | 0.5554 | 7718216 | get_template_part( ) | .../page.php:28 |
| 6 | 0.5554 | 7718792 | locate_template( ) | .../general-template.php:206 |
| 7 | 0.5555 | 7718920 | load_template( ) | .../template.php:720 |
| 8 | 0.5555 | 7719232 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
| 9 | 0.5568 | 7736408 | the_content( ) | .../content-page.php:22 |
| 10 | 0.5571 | 7736656 | apply_filters( ) | .../post-template.php:256 |
| 11 | 0.5571 | 7737056 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
| 12 | 0.5586 | 7742584 | do_shortcode( ) | .../class-wp-hook.php:310 |
| 13 | 0.5588 | 7748640 | preg_replace_callback ( ) | .../shortcodes.php:273 |
| 14 | 1.0682 | 7749600 | do_shortcode_tag( ) | .../shortcodes.php:273 |
| 15 | 1.0683 | 7749600 | bicluster_motifs_shortcode( ) | .../shortcodes.php:433 |
| 16 | 1.0684 | 7749728 | file_get_contents ( ) | .../short_codes.php:74 |
ID: 552fac61b744335b89d819c7
# Conditions: 152
# Genes: 8
Residual: 0.42167092780859
# Conditions: 152
# Genes: 8
Residual: 0.42167092780859
Bicluster Motifs
Bicluster Genes
- Rv0526
- Rv0930
- Rv1304
- Rv1502
- Rv2214c
- Rv2290
- Rv2610c
- Rv3150
Bicluster Conditions
- pH4.8vspH6.8..4h.
- pH4.8vspH6.8..4h.A
- pH4.8vspH6.8..4h.B
- pH4.8vspH6.8..4h.C
- pH4.8vspH6.8..7h.
- pH5.2vspH6.8..5h.
- pH5.2vspH6.8..10.5h.
- pH5.6vspH6.8..2h.A
- pH5.6vspH6.8..5h.
- Mtb.response.to.pH.6.5..6.replicates.
- MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.2
- X1ug.mL..59vsDMSO..6hA
- X10ug.mL..59vsDMSO..6hA
- X1ug.mL..109vsDMSO..6h
- X1ug.mL..109vsDMSO..6hA
- X10ug.mL..109vsDMSO..6h
- X10ug.mL..109vsDMSO..6hA
- X.109..0.1ug.mL..vs.DMSO..12h..GEO.acc.GSM28050.
- X.109..10ug.mL..vs.DMSO..12h..replicate.1..GEO.acc..GSM28053.
- X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054.
- X1ug.mL..241vsDMSO..6h
- X1ug.mL..241vsDMSO..6hA
- X10ug.mL..241vsDMSO..6h
- X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046.
- X.241..10ug.mL..DMSO..12h..1
- X.241..10ug.mL..DMSO..12h..2
- X0.2ug.mL..111891.DMSO..5.5h..2
- X0.5ug.mL..111891vsDMSO.6h
- X0.5ug.mL..111891vsDMSO.6hA
- X1ug.mL..111891vsDMSO..6h
- X2ug.mL..111891vsDMSO..6h
- X1ug.mL..111891.DMSO..12h..1
- X1ug.mL..111891.DMSO..12h..2
- X0.5ug.mL..111895vsDMSO..6h
- X1ug.mL..111895vsDMSO..6hA
- X2ug.mL..111895vsDMSO..6hB
- X0.5ug.mL..121940vsDMSO.6h
- X0.5ug.mL..121940vsDMSO.6hA
- X2ug.mL..121940vsDMSO..6h
- X2ug.mL..121940vsDMSO..6hA
- X1ug.mL..121940.DMSO..12h
- X0.5ug.mL..124196vsDMSO..6h
- X0.5ug.mL..124196vsDMSO..6hA
- X1ug.mL..124196vsDMSO..6hA
- X0.1mMGSNO.10ug.mLmdvsDMSO.6h
- DIPED.5ug.mL.vs.DMSO.12h.1
- DIPED.10ug.mL.vs.DMSO.12h.2
- DIPED.50ug.mL.vs.DMSO.12h.2
- DIPED..100ug.mL..DMSO..12h..1
- DIPED..100ug.mL..DMSO..12h..2
- DIPED..100ug.mL..DMSO..12h..3
- X0.1mg.mL.TriclosanvsEtOH..6h
- X0.15mg.mL.TricvsEtOH..6h
- X0.15mg.mL.TricvsEtOH..6hA
- X10ug.mL.TriclosanvsDMSO..6h
- X10ug.mL.TriclosanvsDMSO..6hA
- X10ug.mL.TriclosanvsDMSO..6hB
- X10ug.mL.TriclosanvsDMSO..6hC
- X50ug.mL.Triclosan.DMSO..6h
- X50ug.mL.Triclosan.EtOH
- X50ug.mL.TriclosanvsEtOH..6hA
- X100ug.mL.TriclosanvsEtOH..6h
- X100ug.mL.TriclosanvsEtOH..6hA
- X10ug.mL.EconazolevsEtOH..6h
- X10ug.mL.EconazolevsEtOH..6hA
- X24ug.mL.Econazole.DMSO..6h..1
- X24ug.mL.Econazole.DMSO..6h..2
- X10ug.mL.EMBvsDMSO..6h
- EMB.10ug.mL.vs.DMSO.12h.1
- X0.2mg.mL.AmpvsEtOH..6h
- X0.2mg.mL.AmpvsEtOH..6hC
- X0.32ug.mL.CervsEtOH..6h
- X0.32ug.mL.CervsEtOH..6hA
- X0.5ug.mL.CeruleninvsDMSO..6hC
- X20ug.mL.Cephalexin.Ctrl..6h..1
- X20ug.mL.Cephalexin.Ctrl..6h..2
- X100ug.mL.Cephalexin.Ctrl..6h
- X100ug.mL.Cphx.DMSO..6h
- X100ug.mLCephalexinvsEtOH.6h
- X10ug.mLchlorpromazinevsctrl.6h
- X10ug.mLchlorpromazinevsctrl.6hA
- X10ug.mL.ChlorprovsEtOH
- X10ug.mL.ChlorprovsEtOH..6h
- X20ug.mL.CPZvsDMSO..6h.A
- X60ug.mL.ChlorprovsEtOH..6h
- X10ug.mL.ClotrimvsEtOH..6hA
- X10ug.mL.clotrimvsEtOH..6h
- X24ug.mL.cltrmazole.DMS..6h..1
- X24ug.mL.cltrmazole.DMS..6h..2
- X24ug.mL.cltrmazole.DMS..6h..3
- X10uM.CCCP.DMSO..6h
- X50uM.CCCP.DMSO..6h..1
- X50uM.CCCP.DMSO..6h..2
- X50uM.CCCPvsDMSO..6h
- X1mM.DNP.DMSO..6h..2
- X20uM.DCCD.DMSO..6h..1
- X20uM.DCCD.DMSO..6h..2
- X100uM.DCCD.DMSO..6h
- X100uM.Dipyridylvsctrl..6h
- X150uM.Deferroxaminevsctrl..6hA
- X150uM.Deferroxaminevsctrl..6hB
- X250uM.DeferroxaminevsDMSO..6h
- X2mM.DTTvsDMSO..6h
- X12ug.mLEthionamidevsEtOH.6h
- X40ug.mL.EtavsEtOH..6h
- X0.4ug.mL.INHvsEtOH..6h
- X10ug.mL.menadionevsDMSO..6h
- X10ug.mLmdn.0.1mMGSNO.DMSO..2
- X9ug.mLAscidideminNpvsDMSO.6hA
- X0.2ug.mL.RifvsDMSO..6h
- Rif.5ug.mL.vsDMSO.2.5hA
- X130ug.mL.TLMvsDMSO..6h
- X130ug.mL.TLMvsDMSO..6hA
- X0.13mg.mL.TLMvsDMSO..6hA
- X0.2mg.mL.TLMvsEtOH..6h
- X50ug.mL.Thioridazine.DMSO..6h
- X1uM.ValinomycinvsDMSO..6h.A
- X2mM.ZnSO4.DMSO..6h
- X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.1
- X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.2
- X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.x
- X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.2
- X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.1
- X130ug.ml.TLM.vs.DMSO.6hrs.rep.1
- X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.1
- MTB1254.3524.1._INH_20MIN
- MTB1254.3524.2._INH_20MIN
- MTB1254_INH_20MIN
- X0.2mg.ml.Ampicillin.vs.Ethanol.6hrs
- X10ug.ml.Ethambutol.vs.DMSO.12hrs.3
- X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.y
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.2
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.2
- CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.1
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.1
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.2
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.3
- H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
- H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
- H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
- H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
- H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
- H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.2
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.1
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.2
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.2
- H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.1
- H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.2