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Call Stack | ||||
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1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1141 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1168 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.1801 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.1801 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.1801 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.1802 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.1809 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.1810 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.1810 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.1819 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.1820 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.6881 | 7749520 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.6881 | 7749520 | bicluster_motifs_shortcode( ) | .../shortcodes.php:433 |
16 | 0.6882 | 7749648 | file_get_contents ( ) | .../short_codes.php:74 |
ID: 552f9d9fb744335b89d7cd99
# Conditions: 154
# Genes: 17
Residual: 0.40539780918246
# Conditions: 154
# Genes: 17
Residual: 0.40539780918246
Bicluster Motifs
Bicluster Genes
- Rv0001
- Rv1172c
- Rv1612
- Rv1630
- Rv1728c
- Rv2220
- Rv2427c
- Rv2715
- Rv3116
- Rv3234c
- Rv3438
- Rv3458c
- Rv3464
- Rv3465
- Rv3624c
- Rv3646c
- Rv3706c
- Rv0001
Bicluster Conditions
- X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.x
- X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.x
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.4
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.4
- MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.3
- MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.4
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.2
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.4
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.2
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.4
- MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.4
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.4
- MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.2
- MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.5
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.4
- MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.2
- MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.3
- MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.1
- MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.2
- MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.1
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.4
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.2
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.3
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.4
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.3
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.2
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.4
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.2
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.3
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.4
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.2
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.3
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.4
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.1
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.2
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.4
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.1
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.2
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.3
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.1
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.2
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.2
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.4
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.1
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.2
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.4
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.1
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.3
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.5
- X1ug.mL..109vsDMSO..6h
- X.109..1ug.mL..vs.DMSO..12h..replicate.2..GEO.acc.GSM28052.
- X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046.
- X.241..1ug.mL..DMSO..12h..1
- DIPED.5ug.mL.vs.DMSO.12h.2
- DIPED.10ug.mL.vs.DMSO.12h.1
- DIPED.10ug.mL.vs.DMSO.12h.2
- DIPED..50ug.mL..DMSO..12h
- DIPED.50ug.mL.vs.DMSO.12h.2
- DIPED..100ug.mL..DMSO..12h..1
- DIPED..100ug.mL..DMSO..12h..2
- DIPED..100ug.mL..DMSO..12h..3
- X0.1mg.mL.TriclosanvsEtOH..6h
- X0.1mg.mL.TriclosanvsEtOH..6hA
- X0.1mg.mLTriclosanvsEtOH.6hB
- X10ug.mL.TriclosanvsDMSO..6hC
- X50ug.mL.Triclosan.DMSO..6h
- X50ug.mL.TriclosanvsEtOH..6h
- X100ug.mL.TriclosanvsEtOH..6h
- X100ug.mL.TriclosanvsEtOH..6hA
- X10ug.mL.EMBvsDMSO..6hA
- EMB.10ug.mL.vs.DMSO.12h.1
- EMB.10ug.mL.vs.DMSO.12h.4
- X0.2mg.mL.AmpvsEtOH..6h
- X0.2mg.mL.AmpvsEtOH..6hA
- X0.2mg.mL.AmpvsEtOH..6hB
- X10ug.mL.Amikacin.EtOH..6h
- X0.32ug.mL.CervsEtOH..6h
- X0.5ug.mL.CervsEtOH..6h
- X0.5ug.mL.CervsEtOH..6hA
- X0.5ug.mL.CeruleninvsDMSO..6hA
- X0.5ug.mL.CeruleninvsDMSO..6hC
- X20ug.mL.Cephalexin.Ctrl..6h..1
- X20ug.mL.Cephalexin.Ctrl..6h..2
- X100ug.mLCephalexinvsEtOH.6h
- X100ug.mLCephalexinvsEtOH.6hA
- X5ug.mL.CapvsEtOH..6h
- X5ug.mL.CapvsEtOH..6hA
- X12ug.mLEthionamidevsEtOH.6h
- X12ug.mLEthionamidevsEtOH.6hA
- X40ug.mL.EtavsEtOH..6h
- X40ug.mL.EtavsEtOH..6hA
- X0.2ug.mL.INH.EtOH..6h
- X0.2ug.mL.RifvsDMSO..6h
- Rif.0.5ug.mL.vsDMSO.2.5hA
- Rif.5ug.mL.vsDMSO.2.5h
- X30ug.mL.RoxvsEtOH..6hA
- X2ug.mL.SMvsEtOH..6h
- X2ug.mL.SMvsEtOH..6hA
- X5ug.mLStreptomycinvsEtOH.6h
- X0.13mg.mL.TLMvsDMSO..6hA
- H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep2
- X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.1
- X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.2
- X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.3.x
- X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.x
- X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1
- X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2
- X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.2
- X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.1
- X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.2
- X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.1
- X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.2
- Tet_100uM_30M_01
- Tet_500ng_30M_01
- Tet_5ug_30M_01
- X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A
- X0.2mg.ml.Ampicillin.vs.Ethanol.6hrs
- X10ug.ml.Ethambutol.vs.DMSO.12hrs.3
- X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.3.y
- X5ug.ml.Rifampicin.vs.DMSO.2.5hrs
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.2
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.3
- H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
- H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
- H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
- H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.1
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.2
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.1
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.2
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.2
- H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.2