( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_info/552f8a84b744335b89d763ea): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 666 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.2058 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.2106 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.3251 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.3252 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.3252 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.3252 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.3266 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.3269 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.3269 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.3285 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.3286 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.3286 | 7749184 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.3287 | 7749184 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
16 | 0.3287 | 7749384 | file_get_contents ( ) | .../short_codes.php:666 |
( ! ) Notice: Trying to get property 'bicluster' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 667 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.2058 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.2106 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.3251 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.3252 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.3252 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.3252 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.3266 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.3269 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.3269 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.3285 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.3286 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.3286 | 7749184 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.3287 | 7749184 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
( ! ) Notice: Trying to get property 'id' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 669 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.2058 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.2106 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.3251 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.3252 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.3252 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.3252 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.3266 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.3269 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.3269 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.3285 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.3286 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.3286 | 7749184 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.3287 | 7749184 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
( ! ) Notice: Trying to get property 'num_conditions' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 670 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.2058 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.2106 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.3251 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.3252 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.3252 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.3252 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.3266 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.3269 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.3269 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.3285 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.3286 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.3286 | 7749184 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.3287 | 7749184 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
( ! ) Notice: Trying to get property 'num_genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 671 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.2058 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.2106 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.3251 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.3252 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.3252 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.3252 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.3266 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.3269 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.3269 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.3285 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.3286 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.3286 | 7749184 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.3287 | 7749184 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
( ! ) Notice: Trying to get property 'residual' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 672 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.2058 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.2106 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.3251 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.3252 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.3252 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.3252 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.3266 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.3269 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.3269 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.3285 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.3286 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.3286 | 7749184 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.3287 | 7749184 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
ID:
# Conditions:
# Genes:
Residual:
# Conditions:
# Genes:
Residual:
Bicluster Motifs
Bicluster Genes
- Rv0045c
- Rv0047c
- Rv0135c
- Rv0240
- Rv0302
- Rv0443
- Rv0491
- Rv0535
- Rv0681
- Rv0809
- Rv0857
- Rv1287
- Rv1494
- Rv1831
- Rv2296
- Rv2360c
- Rv2443
- Rv2543
- Rv2548
- Rv2989
- Rv3034c
- Rv3049c
- Rv3225c
- Rv3580c
- Rv3603c
- Rv3644c
- Rv3740c
Bicluster Conditions
- MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1
- MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.3
- High.iron.wt.vs.low.iron.wt.1a
- H37Rv.hypoxia.2hr.rep.1
- H37Rv.hypoxia.2hr.rep.2
- H37Rv.hypoxia.2hr.rep.4
- H37Rv.hypoxia.2hr.rep.5
- H37Rv.hypoxia.2hr.rep.6
- NRP.Day6..3
- NRP.Day8..1
- NRP.Day8..2
- NRP.Day8..3
- NRP.Day10..2
- NRP.Day10..3
- NRP.Day12..3
- NRP.Day14..5
- NRP.Day14..6
- NRP.Day14..8
- NRP.Day14..9
- NRP.Day20..1
- NRP.Day20..2
- NRP.Day30..1
- pH4.8vspH6.8..2h.B
- pH4.8vspH6.8..4h.A
- pH4.8vspH6.8..5h.
- pH4.8vspH6.8..5.5h.
- pH4.8vspH6.8..6h.
- pH4.8vspH6.8..7h.
- pH4.8vspH6.8..11h.
- pH5.2vspH6.8..5.5h.
- pH5.2vspH6.8..10.5h.
- pH5.2vspH6.8..16h.
- pH5.6vspH6.8..7h.
- H37Rv.hypoxia.4hr.rep.3
- H37Rv.hypoxia.4hr.rep.5
- H37Rv.hypoxia.12hr.rep.3
- H37Rv.hypoxia.1.day.rep.3
- H37Rv.hypoxia.1.day.rep.4
- H37Rv.hypoxia.1.day.rep.5
- H37Rv.hypoxia.4.day.rep.2
- H37Rv.hypoxia.4.day.rep.3
- H37Rv.hypoxia.7.day.rep.1
- H37Rv.hypoxia.7.day.rep.2
- H37Rv.hypoxia.7.day.rep.4
- H37Rv.hypoxia.7.day.rep.5
- H37Rv.hypoxia.7.day.rep.6
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
- Starvation_1254_OA50_12h_01
- Starvation_1254_OA50_12h_03
- Starvation_1254_OA50_12h_04
- Starvation_1254_OA50_24h_01
- Starvation_1254_OA50_24h_03
- Starvation_1254_OA50_3d_01
- Starvation_1254_OA50_3d_02
- Starvation_1254_OA50_3d_03
- Starvation_1254_OA50_3d_04
- Starvation_1254_OA50_5d_01
- Starvation_1254_OA50_5d_02
- Starvation_1254_OA50_5d_04
- Starvation_1254_OA50_6h_01
- Starvation_1254_OA50_6h_02
- Starvation_1254_OA50_6h_03
- Starvation_1254_OA50_6h_04
- Starvation_1254_PA50_24h_01
- Starvation_1254_PA50_24h_02
- Starvation_1254_PA50_24h_03
- Starvation_1254_PA50_24h_04
- Starvation_1254_PA50_6h_01
- Starvation_1254_PA50_6h_02
- Starvation_1254_PA50_6h_03
- Starvation_1254_PA50_6h_04
- Starvation_OA50_24h_02
- Starvation_OA50_24h_04
- Starvation_OA50_6h_01
- Starvation_OA50_6h_02
- Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
- H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
- H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
- Mtb.response.to.pH.6.5..6.replicates.
- BCG.24hr.phagosomal.profile
- M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
- M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
- MTB.in.Wild.type.macrophages.for.4hrs
- MTB.in.Wild.type.macrophages.for.24hrs
- Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
- Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
- Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
- Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
- Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
- Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
- Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
- Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
- SG7.AT0_N11A01cy.5
- SG8.A.Day.0.pre_fix_N37A04cy.5
- SG8.B.Day.0.pre_N37A12cy.3
- SG8.D.Day.0.pre_N27A10cy.3
- SG.ISB.3.0B_N30A01cy.5
- SG6_A1_N7A11cy.3
- SG6.D1_N5A05cy.5
- SG6.C1_N5A04cy.5
- SG2.D1_N02A02c5
- SG2.B1_N02A10c3
- SG2.A1_N02A02c3
- SG2.B2_N02A11c3
- SG2.D2_N02A03c5
- SG2.A3_N02A04c3
- SG2.B3_N02A12c3
- SG2.D3_N02A04c5
- SG8.A.Day.5_N37A10cy.3
- SG8.B.Day.5_N37A08cy.5
- SG2.D5_N02A05c5
- SG2.B7_N02A10c5
- SG6C.T7_N11A01cy.3
- SG6_B7_N7A12cy.5
- SG6_A7_N7A12cy.3
- SG7.T7C_N11A10cy.5
- SG8.B.Day.7_N37A09cy.5
- SG8.A.Day.7_N37A11cy.3
- SG12.C0_N32A05cy.5
- SG12.B0_N32A09cy.3
- SG12.A0_N32A01cy.3
- SG12.C1_N32A06cy.5
- SG12.A2_N32A03cy.3
- SG12.A6_N32A05cy.3
- SG12.B6_N32A01cy.5
- SG12.B8_N32A02cy.5
- SG12.C24_N32A11cy.5
- SG12.B24_N32A03cy.5
- SG2.A8_N02A07c3
- SG2.B8_N02A11c5
- SG2.D8_N02A07c5
- SG6D.T8_N11A03cy.3
- SG6.D8_N5A09cy.5
- SG6.B8_N5A07cy.5
- SG6.A8_N5A06cy.5
- SG7.T8C_N11A07cy.3
- SG7.T8B_N11A06cy.3
- SG7.T8D_N11A08cy.3
- SG.ISB.3.8B_N30A05cy.3
- SG.ISB.3.8C_N30A05cy.5
- SG.ISB.3.8D_N30A06cy.3
- SG2.A9_N02A08c3
- SG2.B9_N02A12c5
- SG2.D9_N02A08c5
- SG6.D11_N8A09cy.5
- SG6.C11_N5A12cy.5
- SG7.T12D_N11A12cy.3
- SG7.T12A_N11A09cy.3
- SG12.C120_N32A12cy.5
- SG.ISB.3.12A_N30A06cy.5
- SG6.A14_N8A10cy.5
- SG6.B14_N8A11cy.5
- SG6D.T14_N11A04cy.3
- WT_140mM_NaCl_Rep1
- WT_140mM_NaCl_Rep2
- WT_140mM_NaCl_Rep3
- WT_140mM_NaCl_Rep4