( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_info/552f899bb744335b89d75f80): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 666 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1894 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1939 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.3008 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.3008 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.3008 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.3009 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.3021 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.3024 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.3024 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.3039 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.3040 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.3040 | 7749184 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.3041 | 7749184 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
16 | 0.3041 | 7749384 | file_get_contents ( ) | .../short_codes.php:666 |
( ! ) Notice: Trying to get property 'bicluster' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 667 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1894 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1939 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.3008 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.3008 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.3008 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.3009 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.3021 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.3024 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.3024 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.3039 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.3040 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.3040 | 7749184 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.3041 | 7749184 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
( ! ) Notice: Trying to get property 'id' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 669 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1894 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1939 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.3008 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.3008 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.3008 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.3009 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.3021 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.3024 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.3024 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.3039 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.3040 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.3040 | 7749184 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.3041 | 7749184 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
( ! ) Notice: Trying to get property 'num_conditions' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 670 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1894 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1939 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.3008 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.3008 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.3008 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.3009 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.3021 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.3024 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.3024 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.3039 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.3040 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.3040 | 7749184 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.3041 | 7749184 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
( ! ) Notice: Trying to get property 'num_genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 671 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1894 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1939 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.3008 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.3008 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.3008 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.3009 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.3021 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.3024 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.3024 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.3039 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.3040 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.3040 | 7749184 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.3041 | 7749184 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
( ! ) Notice: Trying to get property 'residual' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 672 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1894 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1939 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.3008 | 7718136 | get_template_part( ) | .../page.php:28 |
6 | 0.3008 | 7718712 | locate_template( ) | .../general-template.php:206 |
7 | 0.3008 | 7718840 | load_template( ) | .../template.php:720 |
8 | 0.3009 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.3021 | 7736328 | the_content( ) | .../content-page.php:22 |
10 | 0.3024 | 7736576 | apply_filters( ) | .../post-template.php:256 |
11 | 0.3024 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.3039 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.3040 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.3040 | 7749184 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.3041 | 7749184 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
ID:
# Conditions:
# Genes:
Residual:
# Conditions:
# Genes:
Residual:
Bicluster Motifs
Bicluster Genes
- Rv0081
- Rv0082
- Rv0083
- Rv0125
- Rv0133
- Rv0181c
- Rv0253
- Rv0256c
- Rv0363c
- Rv0785
- Rv1202
- Rv1342c
- Rv1344
- Rv1345
- Rv1346
- Rv1353c
- Rv1463
- Rv1464
- Rv1465
- Rv1466
- Rv2531c
- Rv3617
- Rv3641c
- Rv3777
- Rv3823c
Bicluster Conditions
- Strain.CDC1551..replicate.1
- Strain.CDC1551..replicate.2
- Strain.CDC1551..replicate.3
- Strain.1006...replicate.1
- Strain.1006...replicate.2
- Strain.1006...replicate.3
- Strain.1254...replicate.4
- Strain.1254...replicate.2
- Strain.1254...replicate.3
- Strain.3160..replicate.1
- Strain.3160..replicate.2
- Strain.3160...replicate.3
- Strain.3160..replicate.4
- Strain.9700665..replicate.1
- Strain.9700665..replicate.2
- Strain.9700665..replicate.3
- Strain.9700665..replicate.4
- Strain.9800608..replicate.1
- Strain.9802501..replicate1
- Strain.9802501..replicate.2
- Strain.9802501..replicate.4
- Strain.9802826..replicate.1
- Strain.9802826..replicate.4
- Strain.M3061a..replicate.1
- Strain.M3061a..replicate.2
- Strain.M3061a..replicate.3
- Strain.M3061a..replicate.4
- H37Rv.Vs.M.bovis.rep1
- H37Rv.Vs.M.bovis.rep4
- H37Rv.0.05..SDS.exposure.for.1h.rep.1
- H37Rv.0.05..SDS.exposure.for.1h.rep.3
- H37Rv.vs..H37Rv.SDS.treated.rep.1
- H37Rv.vs..H37Rv.SDS.treated.rep.2
- H37Rv.vs..H37Rv.SDS.treated.rep.3
- H37Rv.vs..H37Rv.SDS.treated.rep.4
- H37Rv.vs..H37Rv.SDS.treated.rep.5
- pH4.8vspH6.8..2h.
- pH4.8vspH6.8..2h.A
- pH4.8vspH6.8..4h.A
- pH4.8vspH6.8..5h.
- pH4.8vspH6.8..5.5h.
- pH4.8vspH6.8..6h.
- pH4.8vspH6.8..7h.
- pH4.8vspH6.8..11h.
- pH5.2vspH6.8..2h.
- pH5.2vspH6.8..5.5h.
- pH5.2vspH6.8..16h.
- pH5.6vspH6.8..2h.
- pH5.6vspH6.8..4h.
- pH5.6vspH6.8..5h.
- pH5.6vspH6.8..7h.
- pH5.6vspH6.8..16h.
- H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
- H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
- H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
- Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
- Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
- Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
- Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
- Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
- Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
- Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
- Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
- Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
- Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
- Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.2
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.3
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.5
- Glucose_5mM_10min_01
- Glycerol_1.
- Glycerol_1._10M_01
- Glycerol_1._30M_01
- CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.3
- Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.1
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.2
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.4
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.1
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.4
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.5
- Mtb.Erdman.strain.200.ppm.CO.rep.2
- Mtb.Erdman.strain.2000.ppm.CO.rep.1
- MTB.in.Wild.type.macrophages.for.24hrs
- MTB.in.Wild.type.macrophages.for.48hrs
- MTB.in.Wild.type.macrophages...IFNg.for.24hrs
- Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
- Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
- Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
- Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
- Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
- Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
- Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
- Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
- WT_140mM_NaCl_Rep1
- WT_140mM_NaCl_Rep2
- WT_140mM_NaCl_Rep3
- WT_140mM_NaCl_Rep4
- hip.mutant.KL2801..biological.rep1
- hip.mutant.KL2801..biological.rep2
- hip.mutant.KL2825..biological.rep1
- hip.mutant.KL2825..biological.rep2
- hip.mutant.KL2849..biological.rep1
- hip.mutant.KL2849..biological.rep2
- hip.mutant.HTS1090..biological.rep1
- hip.mutant.HTS1105..biological.rep1
- hip.mutant.HTS1105..biological.rep2
- hip.mutant.HT1116..biological.rep2
- hip.mutant.HT1130..biological.rep1
- hip.mutant.HT1130..biological.rep2
- hip.mutant.HT1134..biological.rep1
- hip.mutant.HT1137..biological.rep2
- hip.mutant.HT1170..biological.rep1