Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0141c
• Rv0743c
• Rv1316c
• Rv1519
• Rv1762c
• Rv1838c
• Rv1839c
• Rv2058c
• Rv2107
• Rv2333c
• Rv2353c
• Rv2452c
• Rv2776c
• Rv2809
• Rv2910c
• Rv3143
• Rv3278c
• Rv3369
• Rv3416
• Rv3486
• Rv3517
• Rv3830c
• Rv3861

Bicluster Conditions

• Strain.CDC1551..replicate.1
• Strain.CDC1551..replicate.2
• Strain.CDC1551..replicate.4
• Strain.1006...replicate.3
• Strain.3160..replicate.4
• Strain.9700665..replicate.1
• Strain.9700665..replicate.2
• Strain.9700665..replicate.3
• Strain.9700665..replicate.4
• Strain.9802501..replicate1
• Strain.9802501..replicate.3
• Strain.9802826..replicate.2
• Strain.M3061a..replicate.4
• H37Rv.Vs.M.bovis.rep3
• MTB.strain.1254.Ctrl.vs.high.aeration.rep1
• MTB.strain.1254.Ctrl.vs.high.aeration.rep2
• MTB.strain.1254.Ctrl.vs.high.aeration.rep3
• MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1
• H37Rv.hypoxia.2hr.rep.1
• H37Rv.hypoxia.2hr.rep.3
• H37Rv.hypoxia.2hr.rep.4
• H37Rv.hypoxia.2hr.rep.6
• NRP.Day6..1
• NRP.Day6..3
• NRP.Day8..2
• NRP.Day8..3
• NRP.Day10..1
• NRP.Day10..2
• NRP.Day10..3
• NRP.Day12..2
• NRP.Day12..3
• NRP.Day14..1
• NRP.Day14..2
• NRP.Day14..3
• NRP.Day14..4
• NRP.Day14..5
• NRP.Day14..6
• NRP.Day14..7
• NRP.Day14..8
• NRP.Day14..9
• NRP.Day20..1
• NRP.Day20..2
• NRP.Day30..1
• PBS.Tween.7H9
• PBS.Tw.DMSOvs7H9..6h
• H37Rv.hypoxia.4hr.rep.4
• H37Rv.hypoxia.4hr.rep.6
• H37Rv.hypoxia.4hr.rep.7
• H37Rv.hypoxia.8hr.rep.3
• H37Rv.hypoxia.12hr.rep.1
• H37Rv.hypoxia.12hr.rep.2
• H37Rv.hypoxia.1.day.rep.3
• H37Rv.hypoxia.1.day.rep.4
• H37Rv.hypoxia.1.day.rep.5
• H37Rv.hypoxia.1.day.rep.9
• H37Rv.hypoxia.4.day.rep.4
• H37Rv.hypoxia.4.day.rep.6
• H37Rv.hypoxia.4.day.rep.7
• H37Rv.hypoxia.7.day.rep.1
• H37Rv.hypoxia.7.day.rep.4
• H37Rv.hypoxia.7.day.rep.5
• H37Rv.hypoxia.7.day.rep.7
• H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
• H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
• H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
• H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
• H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
• Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
• Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
• Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
• Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
• Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
• Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
• Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
• Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
• Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
• Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
• H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2
• H37Rv.wild.type.Vs.H37Rv.wild.type.rep.5
• H37Rv.wild.type.Vs.H37Rv.wild.type.rep.6
• Whole.Lung.Surfactant.2hrs.rep.2
• Whole.Lung.Surfactant.2hrs.rep.3
• Whole.Lung.Surfactant.30min.rep.1
• Whole.Lung.Surfactant.30min.rep.3
• Whole.Lung.Surfactant.30min.rep.4
• Extracted.Lung.Surfactant.2hrs.rep.2
• Extracted.Lung.Surfactant.30min.rep.1
• Extracted.Lung.Surfactant.30min.rep.2
• Extracted.Lung.Surfactant.30min.rep.3
• Purified.Surfactant.Lipids.2hrs.rep.2
• Purified.Surfactant.Lipids.30min.rep.1
• Purified.Human.SP.A.Coated.2hrs.rep1
• Purified.Human.SP.A.Coated.2hrs.rep2
• Purified.Human.SP.A.Uncoated.2hrs.rep1
• Purified.Human.SP.A.Uncoated.2hrs.rep3
• Purified.Human.SP.A.Uncoated.2hrs.rep4
• Glycerol_1.
• Glycerol_1._10M_01
• CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.3
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.1
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.2
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.4
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.1
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.2
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.4
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.5
• H37Rv.reaeration.for.1hrs.rep.1
• H37Rv.reaeration.for.1hrs.rep.2
• H37Rv.reaeration.for.1hrs.rep.3
• H37Rv.reaeration.for.1hrs.rep.6
• H37Rv.reaeration.for.4hrs.rep.3
• H37Rv.reaeration.for.4hrs.rep.5
• H37Rv.reaeration.for.4hrs.rep.7
• H37Rv.reaeration.for.4hrs.rep.8
• H37Rv.reaeration.for.6hrs.rep.1
• H37Rv.reaeration.for.6hrs.rep.3
• H37Rv.reaeration.for.12hrs.rep.2
• H37Rv.reaeration.for.12hrs.rep.4
• H37Rv.reaeration.for.12hrs.rep.6
• H37Rv.reaeration.for.24hrs.rep.1
• H37Rv.reaeration.for.24hrs.rep.2
• H37Rv.reaeration.for.24hrs.rep.3
• H37Rv.reaeration.for.24hrs.rep.5
• H37Rv.reaeration.for.24hrs.rep.6
• SG2.A0_N02A01c3
• SG2.B0_N02A09c3
• SG7.CT0_N11A03cy.5
• SG8.C.Day.0.pre_N27A07cy.3
• SG8.C.Day.1_N37A11cy.5
• SG8.C.Day.1_N27A09cy.3
• SG8.D.Day.1_N27A12cy.3
• SG8.B.Day.1_N37A05cy.5
• SG8.A.Day.1_fix_N37A03cy.5
• SG7.DT1_N11A08cy.5
• SG7.CT1_N11A07cy.5
• SG7.BT1_N11A06cy.5
• SG6_B1_N7A11cy.5
• SG6_A1_N7A11cy.3
• SG6.D1_N5A05cy.5
• SG6.C1_N5A04cy.5
• SG8.A.Day.3_N37A09cy.3
• SG8.A.Day.5_N37A10cy.3
• SG2.D7_N02A06c5
• SG6D.T7_N11A02cy.3
• SG7.T7B_N11A09cy.5
• SG7.T7D_N11A11cy.5
• SG12.B1_N32A10cy.3
• SG12.A4_N32A04cy.3
• SG12.B4_N32A12cy.3
• SG12.C8_N32A10cy.5
• SG12.B24_N32A03cy.5
• SG2.B8_N02A11c5
• SG2.D8_N02A07c5
• SG6D.T8_N11A03cy.3
• SG6.D8_N5A09cy.5
• SG2.D9_N02A08c5
• SG6.A11_N5A10cy.5
• hip.mutant.KL2801..biological.rep1
• hip.mutant.KL2801..biological.rep2
• hip.mutant.KL2825..biological.rep1
• hip.mutant.KL2849..biological.rep1
• hip.mutant.HTS1090..biological.rep1
• hip.mutant.HTS1090..biological.rep2
• hip.mutant.HTS1105..biological.rep1
• hip.mutant.HTS1105..biological.rep2
• hip.mutant.HT1116..biological.rep2
• hip.mutant.HT1120..biological.rep1
• hip.mutant.HT1130..biological.rep2
• hip.mutant.HT1134..biological.rep2
• hip.mutant.HT1137..biological.rep2
• hip.mutant.HT1170..biological.rep2
• MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.3
• X0.1mMGSNO.10ug.mLmdvsDMSO.6h
• X0.1mMGSNO.20ug.mLCPZvsDMSO.6hA
• X25ug.mLCPZ.0.1mMGSNO.DMSO..1
• X25ug.mLCPZ.0.1mMGSNOvsDMSO.A
• X5ug.mL.CFZ.0.1mM.GSNO.DMSO..1
• X5ug.mL.CFZ.0.1mM.GSNO.DMSO..2
• X5ug.mLCFZ.0.1mMGSNOvsDMSO.A
• X0.1mMGSNO.5ug.mLKCNvsDMSO.6h
• X0.1mMGSNO.5ug.mLKCNvsDMSO.6h.A
• X24ug.mL.Econazole.DMSO..6h..1
• X10ug.mL.clofazimine.DMSO..6h
• X13ug.mL.clfzine.DMSO..6h..1
• X10ug.mLchlorpromazinevsctrl.6h
• X10ug.mLchlorpromazinevsctrl.6hA
• X20ug.mL.chlorprmz.DMSO..6h..1
• X20ug.mL.CPZvsDMSO..6h.A
• X25ug.mL.CPZvsDMSO..6h.A
• X10ug.mL.clotrimvsEtOH..6h
• X24ug.mL.cltrmazole.DMS..6h..1
• X24ug.mL.cltrmazole.DMS..6h..2
• X24ug.mL.cltrmazole.DMS..6h..3
• X10uM.CCCP.DMSO..6h
• X50uM.CCCP.DMSO..6h..1
• X50uM.CCCP.DMSO..6h..2
• X50uM.CCCPvsDMSO..6h
• X1mM.DNP.DMSO..6h..1
• X1mM.DNP.DMSO..6h..2
• X2.5mM.Dinitrophenol.DMSO..6h
• X20uM.DCCD.DMSO..6h..1
• X20uM.DCCD.DMSO..6h..2
• X100uM.DCCD.DMSO..6h
• X2mM.DTTvsDMSO..6h
• X2mM.DTTvsDMSO..6h.A
• X5ug.mL.KCN.DMSO..6h..1
• X5ug.mL.KCN.DMSO..6h..2
• X6ug.mL.MenadionevsDMSO..6h
• X10ug.mL.menadionevsDMSO..6h
• X10ug.mLmdn.0.1mMGSNO.DMSO..2
• X50uM.NigericinvsDMSO..6h
• X10ug.mL.TRZ.DMSO..6h..1
• X25ug.mL.TRZ.DMSO..6h
• X50ug.mL.Thioridazine.DMSO..6h
• X2mM.ZnSO4.DMSO..6h
• H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep.1
• H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep2
• H37Rv.Ctrl.vs.5.ug.ml.garlic.extract.6hrs
• H37Rv.Ctrl.vs.10.ug.ml.garlic.extract.6hrs
• X20ug.ml.KCN.vs.DMSO.6hrs.y
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.1
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.1
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.1