Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0103c
• Rv0203
• Rv0510
• Rv0539
• Rv1591
• Rv1692
• Rv1693
• Rv1708
• Rv1709
• Rv1711
• Rv1712
• Rv1713
• Rv2183c
• Rv2439c
• Rv2463
• Rv2908c
• Rv3032
• Rv3220c
• Rv3328c
• Rv3440c
• Rv3580c

Bicluster Conditions

• H37Rv.0.05..SDS.exposure.for.1h.rep.1
• H37Rv.0.05..SDS.exposure.for.1h.rep.3
• H37Rv.0.05..SDS.exposure.for.1h.rep.4
• MTB.strain.1254.Ctrl.vs.high.aeration.rep1
• MTB.strain.1254.Ctrl.vs.high.aeration.rep2
• MTB.strain.1254.Ctrl.vs.high.aeration.rep3
• H37Rv.vs..H37Rv.SDS.treated.rep.5
• High.iron.wt.vs.low.iron.wt.2a
• High.iron.wt.vs.low.iron.wt.3a
• High.iron.wt.vs.low.iron.wt.3b
• H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.1
• H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.3
• H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.5
• Whole.Lung.Surfactant.2hrs.rep.1
• Whole.Lung.Surfactant.2hrs.rep.2
• Whole.Lung.Surfactant.30min.rep.1
• Whole.Lung.Surfactant.30min.rep.3
• Whole.Lung.Surfactant.30min.rep.5
• Extracted.Lung.Surfactant.2hrs.rep.1
• Extracted.Lung.Surfactant.30min.rep.3
• Purified.Surfactant.Lipids.2hrs.rep.1
• Purified.Surfactant.Lipids.2hrs.rep.2
• Purified.Surfactant.Lipids.30min.rep.2
• Purified.Human.SP.A.Coated.2hrs.rep1
• Purified.Human.SP.A.Uncoated.2hrs.rep1
• Purified.Human.SP.A.Uncoated.2hrs.rep2
• X20ug.ml.KCN.vs.DMSO.6hrs.x
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
• Starvation_1254_OA50_12h_02
• Starvation_1254_OA50_12h_03
• Starvation_1254_OA50_12h_04
• Starvation_1254_OA50_3d_04
• Starvation_1254_OA50_5d_01
• Starvation_1254_OA50_6h_01
• Starvation_1254_OA50_6h_02
• Starvation_1254_OA50_6h_03
• Starvation_1254_OA50_6h_04
• Starvation_1254_PA50_6h_04
• Starvation_OA50_24h_01
• Starvation_OA50_24h_02
• Starvation_OA50_6h_01
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
• H37Rv.reaeration.for.1hrs.rep.1
• H37Rv.reaeration.for.1hrs.rep.2
• H37Rv.reaeration.for.1hrs.rep.4
• H37Rv.reaeration.for.1hrs.rep.5
• H37Rv.reaeration.for.1hrs.rep.6
• H37Rv.reaeration.for.1hrs.rep.8
• H37Rv.reaeration.for.4hrs.rep.1
• H37Rv.reaeration.for.4hrs.rep.2
• H37Rv.reaeration.for.4hrs.rep.5
• H37Rv.reaeration.for.4hrs.rep.7
• H37Rv.reaeration.for.4hrs.rep.8
• H37Rv.reaeration.for.6hrs.rep.1
• H37Rv.reaeration.for.6hrs.rep.2
• H37Rv.reaeration.for.12hrs.rep.1
• H37Rv.reaeration.for.12hrs.rep.2
• H37Rv.reaeration.for.12hrs.rep.3
• H37Rv.reaeration.for.12hrs.rep.5
• H37Rv.reaeration.for.24hrs.rep.1
• H37Rv.reaeration.for.24hrs.rep.3
• H37Rv.reaeration.for.24hrs.rep.4
• BCG.2hr.phagosomal.profile
• M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
• M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
• MTB.in.Wild.type.macrophages...IFNg.for.24hrs
• MTB.in.Wild.type.macrophages...IFNg.for.48hrs
• Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
• Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
• Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
• Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
• Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
• Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
• Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
• Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
• Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
• MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.1
• X0.5ug.mL..111891vsDMSO.6h
• X1.ug.mL..111891vsDMSO..6h
• X1ug.mL..111891vsDMSO..6h
• X0.5ug.mL..111895vsDMSO..6h
• X0.5ug.mL..111895vsDMSO.6h
• X2ug.mL..111895vsDMSO..6h
• X2ug.mL..111895vsDMSO..6hA
• X0.5ug.mL..121940vsDMSO.6hA
• X0.5ug.mL..124196vsDMSO..6h
• X0.5ug.mL..124196vsDMSO..6hA
• X0.1mMGSNO.20ug.mLCPZvsDMSO.6hA
• X25ug.mLCPZ.0.1mMGSNO.DMSO..1
• X25ug.mLCPZ.0.1mMGSNO.DMSO..2
• X5ug.mL.CFZ.0.1mM.GSNO.DMSO..1
• X5ug.mLCFZ.0.1mMGSNOvsDMSO.A
• X0.1mMGSNO.5ug.mLKCNvsDMSO.6h
• X0.1mMGSNO.5ug.mLKCNvsDMSO.6h.A
• X10ug.mL.EconazolevsEtOH..6h
• X10ug.mL.EconazolevsEtOH..6hA
• X10ug.mL.clofazimine.DMSO..6h
• X10ug.mLchlorpromazinevsctrl.6h
• X10ug.mLchlorpromazinevsctrl.6hA
• X20ug.mL.chlorprmz.DMSO..6h..1
• X20ug.mL.chlorprmz.DMSO..6h..2
• X20ug.mL.CPZvsDMSO..6h.A
• X25ug.mL.CPZvsDMSO..6h.A
• X25ug.mL.CPZvsDMSO..6h.B
• X10ug.mL.ClotrimvsEtOH..6hA
• X24ug.mL.cltrmazole.DMS..6h..1
• X0.5mM.DNP.DMSO..6h
• X1mM.DNP.DMSO..6h..2
• X20uM.DCCD.DMSO..6h..2
• X100uM.DCCD.DMSO..6h
• X100uM.DipyridylvsCtrl..6hA
• X100uM.Dipyridylvsctrl..6h
• X200uM.Dipyridylvsctrl..6h
• X200uM.Dipyridylvsctrl..6hA
• X150uM.Deferroxaminevsctrl..6hA
• X150uM.Deferroxaminevsctrl..6hB
• X2mM.DTTvsDMSO..6h
• X2mM.DTTvsDMSO..6h.A
• X5ug.mL.KCN.DMSO..6h..1
• X5ug.mL.KCN.DMSO..6h..2
• X6ug.mL.MenadionevsDMSO..6h
• X10ug.mLmdn.0.1mMGSNO.DMSO..2
• X9ug.mLAscidideminNpvsDMSO.6h
• X10ug.mL.TRZ.DMSO..6h..1
• X10ug.mL.TRZ.DMSO..6h..2
• X2mM.ZnSO4.DMSO..6h
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.2
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.1
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.2
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.1
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.1