Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0029
• Rv0030
• Rv0163
• Rv0369c
• Rv0489
• Rv0523c
• Rv0531
• Rv0645c
• Rv0853c
• Rv1014c
• Rv1036c
• Rv1061
• Rv1151c
• Rv1176c
• Rv1247c
• Rv1529
• Rv1786
• Rv1865c
• Rv1897c
• Rv1924c
• Rv2018
• Rv2019
• Rv2464c
• Rv2808
• Rv2873
• Rv3358
• Rv3697c
• Rv3744

Bicluster Conditions

• H37Rv..7H9.shake.replicate.1
• H37Rv..7H9.shake.replicate.2
• H37Rv..7H9.shake.replicate.3
• H37Rv..Dubos.media.replicate.1
• H37Rv..Dubos.media.replicate.2
• H37Rv..Dubos.media.replicate.3
• H37Rv..Sauton.s.media.replicate.2
• H37Rv..Youman.media.replicate.1
• H37Rv..7H9.roll.replicate.1.y
• H37Rv..7H9.roll.replicate.2.y
• MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.2
• MTB1254.Day.0.rep.3
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.3
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.4
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.6
• MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1
• MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2
• High.iron.wt.vs.low.iron.wt.1b
• High.iron.wt.vs.low.iron.wt.2b
• High.iron.wt.vs.low.iron.wt.3a
• MTB1254.vs..MTB1254.rep4
• MTB1254.vs..MTB1254.rep6
• H37Rv.hypoxia.2hr.rep.1
• H37Rv.hypoxia.2hr.rep.2
• H37Rv.hypoxia.2hr.rep.3
• H37Rv.hypoxia.2hr.rep.4
• H37Rv.hypoxia.2hr.rep.5
• H37Rv.0.2..Oxygen..2h..1
• H37Rv.0.2..Oxygen..2h..2
• H37Rv.0.2..Oxygen..2h..5
• H37Rv.0.2..Oxygen..2h..6
• H37Rv.Day6.1
• H37Rv.Day6.2
• H37Rv.Day8.2
• H37Rv.Day14.2
• H37Rv.Day14.3
• H37Rv.Day60.1
• H37Rv.Day60.2
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.3
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.4
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.5
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.6
• NRP.Day6..1
• NRP.Day6..2
• NRP.Day8..1
• NRP.Day8..3
• NRP.Day10..1
• NRP.Day10..2
• NRP.Day14..1
• NRP.Day14..2
• NRP.Day14..4
• NRP.Day14..7
• NRP.Day14..9
• NRP.Day20..1
• NRP.Day20..2
• NRP.Day30..1
• WT.t.6h.WT.t.0h..1
• WT.t.0h.WT.t.6h..1
• WT.t.0h.WT.t.6h..2
• pH4.8vspH6.8..2h.
• pH4.8vspH6.8..2h.A
• pH4.8vspH6.8..2h.B
• pH4.8vspH6.8..4h.
• pH4.8vspH6.8..4h.A
• pH4.8vspH6.8..4h.B
• pH4.8vspH6.8..4h.C
• pH4.8vspH6.8..5h.
• pH4.8vspH6.8..6h.
• pH4.8vspH6.8..11h.
• pH5.2vspH6.8..2h.
• pH5.2vspH6.8..5h.
• pH5.2vspH6.8..5.5h.
• pH5.2vspH6.8..10.5h.
• pH5.2vspH6.8..11h.
• pH5.6vspH6.8..4h.
• pH5.6vspH6.8..5h.
• pH5.6vspH6.8..7h.
• pH5.6vspH6.8..11h.
• pH5.6vspH6.8..16h.
• Mtm.0.2ug.mL.vs.ctrl.8h.1.x
• Mtm.0.2ug.mL.vs.ctrl.8h.2.x
• Mtm.0.2ug.mL.vs.ctrl.12h.1.x
• X4mM.H2O2vsctrl..1h.
• X4mM.H2O2vsctrl..2h.
• X4mM.H2O2.ctrl..2h...1
• X4mM.H2O2.ctrl..2h...2
• X4mM.H2O2.ctrl..4h...1
• Succinate.7H9.based.medium..1
• Succinate.7H9.based.medium..2
• H37Rv.hypoxia.8hr.rep.1
• H37Rv.hypoxia.1.day.rep.2
• H37Rv.hypoxia.1.day.rep.4
• H37Rv.hypoxia.4.day.rep.1
• H37Rv.hypoxia.4.day.rep.3
• H37Rv.hypoxia.7.day.rep.4
• H37Rv.diamide.1h.rep.1
• H37Rv.diamide.1h.rep.4
• H37Rv.diamide.1h.rep.6
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.1
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6
• aceatate.induction.3
• Acetate.3mM.10m.03
• Acetate.3mM.10m.06
• Acetate.3mM.2h.01
• Acetate.3mM.2h.02
• Acetate.3mM.2h.04
• Acetate.3mM.2h.05
• Acetate.3mM.2h.06
• Acetate.3mM.30m.01
• Acetate.3mM.30m.02
• Acetate.3mM.30m.04
• Acetate.3mM.30m.05
• Acetate.3mM.30m.06
• Acetate.3mM.30m.07
• Acetate.3mM.30m.08
• Acetate.3mM.60m.04
• CHP_25uM_1h_01
• CHP_25uM_24h_01
• CHP_25uM_2h_01
• Starvation_1254_12h_03
• Starvation_1254_24h_02
• Starvation_1254_24h_03
• Starvation_1254_24h_05
• Starvation_1254_24h_06
• Starvation_1254_24h_07
• Starvation_1254_24h_08
• Starvation_1254_6h_02
• Starvation_1254_6h_03
• Starvation_1254_6h_04
• Starvation_1254_6h_06
• Starvation_1254_6h_07
• Starvation_1254_6h_08
• Starvation_1254_OA50_12h_02
• Starvation_1254_OA50_12h_04
• Starvation_1254_OA50_24h_01
• Starvation_1254_OA50_24h_02
• Starvation_1254_OA50_24h_03
• Starvation_1254_OA50_24h_04
• Starvation_1254_OA50_3d_04
• Starvation_1254_OA50_5d_01
• Starvation_1254_OA50_5d_03
• Starvation_1254_OA50_6h_01
• Starvation_1254_OA50_6h_02
• Starvation_1254_PA50_24h_02
• Starvation_1254_PA50_24h_03
• Starvation_1254_PA50_24h_04
• Starvation_1254_PA50_6h_01
• Starvation_1254_PA50_6h_02
• Starvation_1254_PA50_6h_03
• Starvation_1254_PA50_6h_04
• Starvation_OA50_24h_01
• Starvation_OA50_24h_03
• Starvation_OA50_24h_04
• Starvation_OA50_6h_01
• Starvation_OA50_6h_02
• Starvation_OA50_6h_03
• Starvation_OA50_6h_04
• H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1
• H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.3
• CDC1551.Ctrl.vs.H37Rv.rep.1
• CDC1551.Ctrl.vs.H37Rv.rep.2
• CDC1551.Ctrl.vs.H37Rv.rep.3
• CDC1551.ctrl.vs.ctrl.at.0.hr.rep.2
• Mtb.response.to.pH.5.5..6.replicates.
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.6
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.1
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.3
• SG2.A0_N02A01c3
• SG2.B0_N02A09c3
• SG2.D0_N02A01c5
• SG6.H0_N5A03cy.5
• SG6_A0_N7A10cy.3
• SG6_B0_N7A10cy.5
• SG7.CT0_N11A03cy.5
• SG7.DT0_N11A04cy.5
• SG8.D.Day.1_N27A12cy.3
• SG8.B.Day.1_N37A05cy.5
• SG8.A.Day.1_fix_N37A03cy.5
• SG6.C1_N5A04cy.5
• SG2.B1_N02A10c3
• SG8.C.Day.2_N37A12cy.5
• SG8.B.Day.3_N37A07cy.5
• SG8.A.Day.5_N37A10cy.3
• SG7.T7B_N11A09cy.5
• SG7.T7D_N11A11cy.5
• SG8.A.Day.7_N37A11cy.3
• SG.ISB.3.7B_N30A03cy.3
• SG.ISB.3.7D_N30A04cy.3
• SG12.C0_N32A05cy.5
• SG12.A2_N32A03cy.3
• SG12.A8_N32A06cy.3
• SG12.B24_N32A03cy.5
• SG12.A24_N32A07cy.3
• SG2.A8_N02A07c3
• SG2.D8_N02A07c5
• SG6D.T8_N11A03cy.3
• SG6.D8_N5A09cy.5
• SG6.C8_N5A08cy.5
• SG7.T8A_N11A05cy.3
• SG.ISB.3.8A_N30A04cy.5
• SG.ISB.3.8C_N30A05cy.5
• SG2.A9_N02A08c3
• SG2.B9_N02A12c5
• SG6.D11_N8A09cy.5
• SG6.B11_N5A11cy.5
• SG6.A11_N5A10cy.5
• SG7.T12C_N11A11cy.3
• SG.ISB.3.12C_N30A07cy.5
• SG6.A14_N8A10cy.5
• SG6.B14_N8A11cy.5
• SG6.C14_N8A12cy.5
• SS_A1_RV.2
• A00470_Q3_t90_diamide
• A00437_Q1_t30_diamide
• A00437_Q2_t60_diamide
• A00437_Q3_t90_diamide
• A00436_Q1_t30_diamide
• A00436_Q2_t60_diamide
• Mtm.0.2ug.mL.vs.ctrl.8h.1.y
• Mtm.0.2ug.mL.vs.ctrl.12h.1.y