| ( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_genes/552f5bc1b744335b89d66161): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 15 | ||||
|---|---|---|---|---|
| Call Stack | ||||
| # | Time | Memory | Function | Location |
| 1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
| 2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
| 3 | 0.1136 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
| 4 | 0.1163 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
| 5 | 0.1792 | 7718136 | get_template_part( ) | .../page.php:28 |
| 6 | 0.1792 | 7718712 | locate_template( ) | .../general-template.php:206 |
| 7 | 0.1792 | 7718840 | load_template( ) | .../template.php:720 |
| 8 | 0.1792 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
| 9 | 0.1800 | 7736328 | the_content( ) | .../content-page.php:22 |
| 10 | 0.1801 | 7736576 | apply_filters( ) | .../post-template.php:256 |
| 11 | 0.1801 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
| 12 | 0.1811 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
| 13 | 0.1812 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
| 14 | 3.1718 | 7757480 | do_shortcode_tag( ) | .../shortcodes.php:273 |
| 15 | 3.1718 | 7757952 | bicluster_genes_shortcode( ) | .../shortcodes.php:433 |
| 16 | 3.1720 | 7758456 | file_get_contents ( ) | .../short_codes.php:15 |
| ( ! ) Notice: Trying to get property 'genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 16 | ||||
|---|---|---|---|---|
| Call Stack | ||||
| # | Time | Memory | Function | Location |
| 1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
| 2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
| 3 | 0.1136 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
| 4 | 0.1163 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
| 5 | 0.1792 | 7718136 | get_template_part( ) | .../page.php:28 |
| 6 | 0.1792 | 7718712 | locate_template( ) | .../general-template.php:206 |
| 7 | 0.1792 | 7718840 | load_template( ) | .../template.php:720 |
| 8 | 0.1792 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
| 9 | 0.1800 | 7736328 | the_content( ) | .../content-page.php:22 |
| 10 | 0.1801 | 7736576 | apply_filters( ) | .../post-template.php:256 |
| 11 | 0.1801 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
| 12 | 0.1811 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
| 13 | 0.1812 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
| 14 | 3.1718 | 7757480 | do_shortcode_tag( ) | .../shortcodes.php:273 |
| 15 | 3.1718 | 7757952 | bicluster_genes_shortcode( ) | .../shortcodes.php:433 |
| ( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 18 | ||||
|---|---|---|---|---|
| Call Stack | ||||
| # | Time | Memory | Function | Location |
| 1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
| 2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
| 3 | 0.1136 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
| 4 | 0.1163 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
| 5 | 0.1792 | 7718136 | get_template_part( ) | .../page.php:28 |
| 6 | 0.1792 | 7718712 | locate_template( ) | .../general-template.php:206 |
| 7 | 0.1792 | 7718840 | load_template( ) | .../template.php:720 |
| 8 | 0.1792 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
| 9 | 0.1800 | 7736328 | the_content( ) | .../content-page.php:22 |
| 10 | 0.1801 | 7736576 | apply_filters( ) | .../post-template.php:256 |
| 11 | 0.1801 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
| 12 | 0.1811 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
| 13 | 0.1812 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
| 14 | 3.1718 | 7757480 | do_shortcode_tag( ) | .../shortcodes.php:273 |
| 15 | 3.1718 | 7757952 | bicluster_genes_shortcode( ) | .../shortcodes.php:433 |
| ( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 29 | ||||
|---|---|---|---|---|
| Call Stack | ||||
| # | Time | Memory | Function | Location |
| 1 | 0.0000 | 398720 | {main}( ) | .../index.php:0 |
| 2 | 0.0000 | 399000 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
| 3 | 0.1136 | 7193632 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
| 4 | 0.1163 | 7197376 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
| 5 | 0.1792 | 7718136 | get_template_part( ) | .../page.php:28 |
| 6 | 0.1792 | 7718712 | locate_template( ) | .../general-template.php:206 |
| 7 | 0.1792 | 7718840 | load_template( ) | .../template.php:720 |
| 8 | 0.1792 | 7719152 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
| 9 | 0.1800 | 7736328 | the_content( ) | .../content-page.php:22 |
| 10 | 0.1801 | 7736576 | apply_filters( ) | .../post-template.php:256 |
| 11 | 0.1801 | 7736976 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
| 12 | 0.1811 | 7742504 | do_shortcode( ) | .../class-wp-hook.php:310 |
| 13 | 0.1812 | 7748560 | preg_replace_callback ( ) | .../shortcodes.php:273 |
| 14 | 3.1718 | 7757480 | do_shortcode_tag( ) | .../shortcodes.php:273 |
| 15 | 3.1718 | 7757952 | bicluster_genes_shortcode( ) | .../shortcodes.php:433 |
ID: 552f5bc1b744335b89d66161
# Conditions: 149
# Genes: 27
Residual: 0.46376444984104
# Conditions: 149
# Genes: 27
Residual: 0.46376444984104
Bicluster Motifs
Bicluster Genes
Bicluster Conditions
- X0.2ug.mL.Mtmvsctrl..1.5h..x
- X0.2ug.mL.Mtmvsctrl..2h..x
- X0.2ug.mL.Mtmvsctrl..2h.A.x
- X0.2ug.mL.Mtmvsctrl..2h.C.x
- X0.2ug.mL.Mtmvsctrl..4h.A.x
- X0.2ug.mL.Mtmvsctrl..4h.B.x
- X0.2ug.mL.Mtm.ctrl..4h...2.x
- Starvation_1254_24h_01
- Starvation_1254_24h_02
- Starvation_1254_24h_04
- Starvation_1254_24h_07
- Starvation_1254_24h_08
- Starvation_1254_6h_02
- Starvation_1254_6h_04
- Starvation_1254_6h_06
- Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
- MTB.in.Wild.type.macrophages...IFNg.for.48hrs
- Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
- Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
- Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
- Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
- Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
- Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
- Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
- X10ug.mL..59.DMSO..6h
- X10ug.mL..59vsDMSO..6h
- X1ug.mL..109vsDMSO..6h
- X1ug.mL..109vsDMSO..6hA
- X10ug.mL..109.DMSO..6h
- X.109..0.1ug.mL..vs.DMSO..12h..GEO.acc.GSM28050.
- X.109..1ug.mL..vs.DMSO..12h..replicate.1..GEO.ac.GSM28051.
- X.109..1ug.mL..vs.DMSO..12h..replicate.2..GEO.acc.GSM28052.
- X.109..10ug.mL..vs.DMSO..12h..replicate.1..GEO.acc..GSM28053.
- X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054.
- X1ug.mL..241vsDMSO..6hA
- X10ug.mL..241.DMSO..6h
- X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046.
- X.241..1ug.mL..DMSO..12h..1
- X.241..10ug.mL..DMSO..12h..1
- X.241..10ug.mL..DMSO..12h..2
- DIPED.5ug.mL.vs.DMSO.12h.1
- DIPED.5ug.mL.vs.DMSO.12h.2
- DIPED.10ug.mL.vs.DMSO.12h.1
- DIPED.10ug.mL.vs.DMSO.12h.2
- DIPED..50ug.mL..DMSO..12h
- DIPED.50ug.mL.vs.DMSO.12h.1
- DIPED.50ug.mL.vs.DMSO.12h.2
- DIPED..100ug.mL..DMSO..12h..1
- DIPED..100ug.mL..DMSO..12h..2
- DIPED..100ug.mL..DMSO..12h..3
- X0.2ug.mL.Mtmvsctrl..0.75h..y
- X0.2ug.mL.Mtmvsctrl..1.5h..y
- X0.2ug.mL.Mtmvsctrl..2h..y
- X0.2ug.mL.Mtmvsctrl..2h.C.y
- X0.2ug.mL.Mtmvsctrl..4h.A.y
- X0.2ug.mL.Mtmvsctrl..4h.B.y
- X0.2ug.mL.Mtm.ctrl..4h...2.y
- X0.2ug.mL.Mtmvsctrl..6h..y
- X0.1mg.mL.TriclosanvsEtOH..6h
- X0.1mg.mL.TriclosanvsEtOH..6hA
- X0.1mg.mLTriclosanvsEtOH.6hB
- X0.1mg.mLTriclosanvsEtOH.6hC
- X0.15mg.mL.TricvsEtOH..6h
- X0.15mg.mL.TricvsEtOH..6hA
- X10ug.mL.TriclosanvsDMSO..6h
- X10ug.mL.TriclosanvsDMSO..6hA
- X10ug.mL.TriclosanvsDMSO..6hB
- X50ug.mL.TriclosanvsEtOH..6h
- X50ug.mL.TriclosanvsEtOH..6hA
- X100ug.mL.TriclosanvsEtOH..6h
- X100ug.mL.TriclosanvsEtOH..6hA
- EMB..10ug.mL..DMSO..12h
- EMB.10ug.mL.vs.DMSO.12h.1
- EMB.10ug.mL.vs.DMSO.12h.2
- EMB.10ug.mL.vs.DMSO.12h.3
- EMB.10ug.mL.vs.DMSO.12h.4
- X20ug.mL.ethambutol.DMSO
- X0.2mg.mL.AmpvsEtOH..6h
- X0.2mg.mL.AmpvsEtOH..6hB
- X0.2mg.mL.AmpvsEtOH..6hC
- X0.32ug.mL.CervsEtOH..6h
- X0.32ug.mL.CervsEtOH..6hA
- X0.5ug.mL.CervsEtOH..6h
- X0.5ug.mL.CervsEtOH..6hA
- X0.5ug.mL.CeruleninvsDMSO..6hA
- X0.5ug.mL.CeruleninvsDMSO..6hC
- X100ug.mL.Ceph.DMSO..6h
- X12ug.mLEthionamidevsEtOH.6h
- X12ug.mLEthionamidevsEtOH.6hA
- X40ug.mL.EtavsEtOH..6h
- X10ug.mL.Nvb.DMSO..6h..1
- X10ug.mL.Nvb.DMSO..6h..3
- X10ug.mL.OfloxvsDMSO..6h
- Rif.0.5ug.mL.vsDMSO.2.5h
- Rif.0.5ug.mL.vsDMSO.2.5hA
- Rif.5ug.mL.vsDMSO.2.5h
- Rif.5ug.mL.vsDMSO.2.5hA
- X0.1ug.mL.RifpvsEtOH..6h
- X0.1ug.mL.RifpvsEtOH..6hA
- X0.5ug.mLRifapentinevsEtOH.6hA
- X130ug.mL.TLMvsDMSO..6hA
- X0.13mg.mL.TLMvsDMSO..6h
- X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.3.x
- X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.x
- X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2
- X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1
- X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2
- X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.1
- X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.2
- X130ug.ml.TLM.vs.DMSO.6hrs.rep.1
- X130ug.ml.TLM.vs.DMSO.6hrs.rep.2
- X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.1
- X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.2
- X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.1
- X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.2
- X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.3
- X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.4
- X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.1
- X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.2
- MTB1254.3524.2._INH_20MIN
- MTB1254_INH_20MIN
- X0.2mg.ml.Ampicillin.vs.Ethanol.6hrs
- X10ug.ml.Ethambutol.vs.DMSO.12hrs.3
- X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.y
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.1
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.2
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.3
- H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
- H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
- H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
- H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.1
- H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.2
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.2
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.2