Bicluster


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Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.20457193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20927197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.32097718136get_template_part( ).../page.php:28
60.32097718712locate_template( ).../general-template.php:206
70.32107718840load_template( ).../template.php:720
80.32107719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.32237736328the_content( ).../content-page.php:22
100.32257736576apply_filters( ).../post-template.php:256
110.32257736976WP_Hook->apply_filters( ).../plugin.php:205
120.32417742504do_shortcode( ).../class-wp-hook.php:310
130.32437748560preg_replace_callback ( ).../shortcodes.php:273
143.66417757480do_shortcode_tag( ).../shortcodes.php:273
153.66417757952bicluster_genes_shortcode( ).../shortcodes.php:433
163.66437758456file_get_contents ( ).../short_codes.php:15

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Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.20457193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20927197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.32097718136get_template_part( ).../page.php:28
60.32097718712locate_template( ).../general-template.php:206
70.32107718840load_template( ).../template.php:720
80.32107719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.32237736328the_content( ).../content-page.php:22
100.32257736576apply_filters( ).../post-template.php:256
110.32257736976WP_Hook->apply_filters( ).../plugin.php:205
120.32417742504do_shortcode( ).../class-wp-hook.php:310
130.32437748560preg_replace_callback ( ).../shortcodes.php:273
143.66417757480do_shortcode_tag( ).../shortcodes.php:273
153.66417757952bicluster_genes_shortcode( ).../shortcodes.php:433

( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 18
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.20457193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20927197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.32097718136get_template_part( ).../page.php:28
60.32097718712locate_template( ).../general-template.php:206
70.32107718840load_template( ).../template.php:720
80.32107719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.32237736328the_content( ).../content-page.php:22
100.32257736576apply_filters( ).../post-template.php:256
110.32257736976WP_Hook->apply_filters( ).../plugin.php:205
120.32417742504do_shortcode( ).../class-wp-hook.php:310
130.32437748560preg_replace_callback ( ).../shortcodes.php:273
143.66417757480do_shortcode_tag( ).../shortcodes.php:273
153.66417757952bicluster_genes_shortcode( ).../shortcodes.php:433

( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 29
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.20457193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20927197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.32097718136get_template_part( ).../page.php:28
60.32097718712locate_template( ).../general-template.php:206
70.32107718840load_template( ).../template.php:720
80.32107719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.32237736328the_content( ).../content-page.php:22
100.32257736576apply_filters( ).../post-template.php:256
110.32257736976WP_Hook->apply_filters( ).../plugin.php:205
120.32417742504do_shortcode( ).../class-wp-hook.php:310
130.32437748560preg_replace_callback ( ).../shortcodes.php:273
143.66417757480do_shortcode_tag( ).../shortcodes.php:273
153.66417757952bicluster_genes_shortcode( ).../shortcodes.php:433
ID: 552f50c7b744335b89d62050
# Conditions: 111
# Genes: 25
Residual: 0.50092672565317

Bicluster Motifs

Bicluster Genes

    Bicluster Conditions

    • Strain.CDC1551..replicate.2
    • Strain.CDC1551..replicate.4
    • Strain.1006...replicate.1
    • Strain.1006...replicate.3
    • Strain.1254...replicate.2
    • Strain.1254...replicate.3
    • Strain.1254...replicate.1
    • Strain.1843..replicate.1
    • Strain.1843...replicate.3
    • Strain.3160..replicate.1
    • Strain.3160..replicate.4
    • Strain.9700665..replicate.1
    • Strain.9700665..replicate.2
    • Strain.9700665..replicate.4
    • Strain.9800608..replicate.2
    • Strain.9800608..replicate.4
    • Strain.9802501..replicate.3
    • Strain.9802826..replicate.2
    • Strain.9802826..replicate.3
    • Strain.9802826..replicate.4
    • Strain.M3061a..replicate.1
    • Strain.M3061a..replicate.4
    • H37Rv.Vs.M.bovis.rep2
    • H37Rv.Vs.M.bovis.rep3
    • H37Rv.Vs.M.bovis.rep4
    • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
    • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
    • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
    • H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
    • H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
    • Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
    • Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
    • Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
    • Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
    • Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
    • Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
    • Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
    • Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
    • Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
    • Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
    • Whole.Lung.Surfactant.2hrs.rep.1
    • Whole.Lung.Surfactant.2hrs.rep.3
    • Whole.Lung.Surfactant.30min.rep.1
    • Whole.Lung.Surfactant.30min.rep.3
    • Whole.Lung.Surfactant.30min.rep.5
    • Extracted.Lung.Surfactant.2hrs.rep.1
    • Extracted.Lung.Surfactant.2hrs.rep.2
    • Extracted.Lung.Surfactant.30min.rep.1
    • Extracted.Lung.Surfactant.30min.rep.3
    • Purified.Surfactant.Lipids.2hrs.rep.1
    • Purified.Surfactant.Lipids.2hrs.rep.2
    • Purified.Surfactant.Lipids.30min.rep.2
    • Purified.Human.SP.A.Coated.2hrs.rep1
    • Purified.Human.SP.A.Uncoated.2hrs.rep1
    • Purified.Human.SP.A.Uncoated.2hrs.rep2
    • Purified.Human.SP.A.Uncoated.2hrs.rep3
    • Purified.Human.SP.A.Uncoated.2hrs.rep4
    • CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.3
    • CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.3
    • CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.3
    • CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.1
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.1
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.2
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.4
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.2
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.4
    • hip.mutant.KL2801..biological.rep2
    • hip.mutant.KL2825..biological.rep2
    • hip.mutant.HTS1090..biological.rep1
    • hip.mutant.HTS1090..biological.rep2
    • hip.mutant.HTS1105..biological.rep1
    • hip.mutant.HTS1105..biological.rep2
    • hip.mutant.HT1117..biological.rep1
    • hip.mutant.HT1120..biological.rep1
    • hip.mutant.HT1130..biological.rep1
    • hip.mutant.HT1130..biological.rep2
    • hip.mutant.HT1134..biological.rep1
    • hip.mutant.HT1134..biological.rep2
    • hip.mutant.HT1137..biological.rep2
    • hip.mutant.HT1170..biological.rep2
    • X40ug.mL.5CL.pH5.6..2h..1
    • X40ug.mL.5CL.pH5.6..4h..3
    • X80ug.mL.5CL.pH5.6..2h.
    • X0.12mg.mL.BZA.pH5.6..2h.
    • X0.12mg.mL.BZAvspH5.6..5h.
    • X0.12mg.mL.Nam.pH5.6..2h..1
    • X0.12mg.mL.NamvspH5.6..4h.
    • X0.12mg.mL.NamvspH5.6..5.5h.
    • X0.12mg.mL.NamvspH5.6..7h.
    • X1.2mg.mL.NamvspH5.6..5h.
    • X1.2mg.mL.NamvspH5.6..10.5h.
    • X0.12mg.mL.PZA.pH5.6..2h.
    • X0.12mg.mL.PZA.pH5.6..4h..1
    • X0.12mg.mL.PZA.pH5.6..4h..2
    • X0.12mg.mL.PZA.pH5.6..5h.
    • X0.12mg.mL.PZAvspH5.6..6h.
    • X0.12mg.mL.PZAvspH5.6..6h.A
    • X0.12mg.mL.PZAvspH5.6..10.5h.
    • X1.2mg.mL.PZA.pH5.6..2h..
    • X1.2mg.mL.PZA.pH5.6..5h.
    • X1.2mg.mL.PZAvspH5.6..6h.
    • X1.2mg.mL.PZAvspH5.6..6h.A
    • X1.2mg.mL.PZAvspH5.6..7h.A
    • X1.2mg.mL.PZAvspH5.6..10.5h.