Bicluster


( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_info/552f45feb744335b89d5e2fe): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 666
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19517193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19977197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.30817718136get_template_part( ).../page.php:28
60.30817718712locate_template( ).../general-template.php:206
70.30827718840load_template( ).../template.php:720
80.30827719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.30947736328the_content( ).../content-page.php:22
100.30977736576apply_filters( ).../post-template.php:256
110.30977736976WP_Hook->apply_filters( ).../plugin.php:205
120.31127742504do_shortcode( ).../class-wp-hook.php:310
130.31137748560preg_replace_callback ( ).../shortcodes.php:273
140.31137749184do_shortcode_tag( ).../shortcodes.php:273
150.31137749184bicluster_info_shortcode( ).../shortcodes.php:433
160.31147749384file_get_contents ( ).../short_codes.php:666
( ! ) Notice: Trying to get property 'bicluster' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 667
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19517193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19977197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.30817718136get_template_part( ).../page.php:28
60.30817718712locate_template( ).../general-template.php:206
70.30827718840load_template( ).../template.php:720
80.30827719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.30947736328the_content( ).../content-page.php:22
100.30977736576apply_filters( ).../post-template.php:256
110.30977736976WP_Hook->apply_filters( ).../plugin.php:205
120.31127742504do_shortcode( ).../class-wp-hook.php:310
130.31137748560preg_replace_callback ( ).../shortcodes.php:273
140.31137749184do_shortcode_tag( ).../shortcodes.php:273
150.31137749184bicluster_info_shortcode( ).../shortcodes.php:433
( ! ) Notice: Trying to get property 'id' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 669
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19517193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19977197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.30817718136get_template_part( ).../page.php:28
60.30817718712locate_template( ).../general-template.php:206
70.30827718840load_template( ).../template.php:720
80.30827719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.30947736328the_content( ).../content-page.php:22
100.30977736576apply_filters( ).../post-template.php:256
110.30977736976WP_Hook->apply_filters( ).../plugin.php:205
120.31127742504do_shortcode( ).../class-wp-hook.php:310
130.31137748560preg_replace_callback ( ).../shortcodes.php:273
140.31137749184do_shortcode_tag( ).../shortcodes.php:273
150.31137749184bicluster_info_shortcode( ).../shortcodes.php:433
( ! ) Notice: Trying to get property 'num_conditions' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 670
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19517193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19977197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.30817718136get_template_part( ).../page.php:28
60.30817718712locate_template( ).../general-template.php:206
70.30827718840load_template( ).../template.php:720
80.30827719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.30947736328the_content( ).../content-page.php:22
100.30977736576apply_filters( ).../post-template.php:256
110.30977736976WP_Hook->apply_filters( ).../plugin.php:205
120.31127742504do_shortcode( ).../class-wp-hook.php:310
130.31137748560preg_replace_callback ( ).../shortcodes.php:273
140.31137749184do_shortcode_tag( ).../shortcodes.php:273
150.31137749184bicluster_info_shortcode( ).../shortcodes.php:433
( ! ) Notice: Trying to get property 'num_genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 671
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19517193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19977197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.30817718136get_template_part( ).../page.php:28
60.30817718712locate_template( ).../general-template.php:206
70.30827718840load_template( ).../template.php:720
80.30827719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.30947736328the_content( ).../content-page.php:22
100.30977736576apply_filters( ).../post-template.php:256
110.30977736976WP_Hook->apply_filters( ).../plugin.php:205
120.31127742504do_shortcode( ).../class-wp-hook.php:310
130.31137748560preg_replace_callback ( ).../shortcodes.php:273
140.31137749184do_shortcode_tag( ).../shortcodes.php:273
150.31137749184bicluster_info_shortcode( ).../shortcodes.php:433
( ! ) Notice: Trying to get property 'residual' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 672
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19517193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19977197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.30817718136get_template_part( ).../page.php:28
60.30817718712locate_template( ).../general-template.php:206
70.30827718840load_template( ).../template.php:720
80.30827719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.30947736328the_content( ).../content-page.php:22
100.30977736576apply_filters( ).../post-template.php:256
110.30977736976WP_Hook->apply_filters( ).../plugin.php:205
120.31127742504do_shortcode( ).../class-wp-hook.php:310
130.31137748560preg_replace_callback ( ).../shortcodes.php:273
140.31137749184do_shortcode_tag( ).../shortcodes.php:273
150.31137749184bicluster_info_shortcode( ).../shortcodes.php:433
( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_pssms/552f45feb744335b89d5e2fe): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 74
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19517193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19977197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.30817718136get_template_part( ).../page.php:28
60.30817718712locate_template( ).../general-template.php:206
70.30827718840load_template( ).../template.php:720
80.30827719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.30947736328the_content( ).../content-page.php:22
100.30977736576apply_filters( ).../post-template.php:256
110.30977736976WP_Hook->apply_filters( ).../plugin.php:205
120.31127742504do_shortcode( ).../class-wp-hook.php:310
130.31137748560preg_replace_callback ( ).../shortcodes.php:273
141.44167750416do_shortcode_tag( ).../shortcodes.php:273
151.44167750416bicluster_motifs_shortcode( ).../shortcodes.php:433
161.44177750544file_get_contents ( ).../short_codes.php:74
ID:
# Conditions:
# Genes:
Residual:

Bicluster Motifs

Bicluster Genes

  • Rv0569
  • Rv1733c
  • Rv1738
  • Rv1996
  • Rv1997
  • Rv2007c
  • Rv2032
  • Rv2624c
  • Rv2626c
  • Rv2627c
  • Rv3126c
  • Rv3127
  • Rv3129
  • Rv3130c
  • Rv3133c
  • Rv3134c

Bicluster Conditions

  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2.x
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.x
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.x
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.4
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2.x
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3.x
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4.x
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2.x
  • H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
  • H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3
  • H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
  • CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.1
  • CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.2
  • CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.3
  • CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.5
  • X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.x
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.y
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2.y
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.y
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.y
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.y
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3.y
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.7.y
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.y
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.y
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.y
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.4
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1.y
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2.y
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4.y
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4.y
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1.y
  • MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.1
  • MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.2
  • MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.3
  • MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.4
  • MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.5
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.1
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.2
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.2
  • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.1
  • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.3
  • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.3
  • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.1
  • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.2
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.4
  • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3
  • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.1
  • MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.2
  • MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.3
  • MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.5
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.4
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.5
  • MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.1
  • MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.2
  • MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.3
  • MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.1
  • MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.3
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.1
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.3
  • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.1
  • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.2
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.3
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.3
  • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.1
  • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.3
  • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.4
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.1
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.3
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.4
  • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.3
  • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.4
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.4
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.4
  • X5ug.mL.AmivsEtOH..6hA
  • X5ug.mL.KCN.DMSO..6h..2
  • X10ug.mL.RoxvsEtOH..6hA
  • X30ug.mL.RoxvsEtOH..6h
  • X30ug.mL.RoxvsEtOH..6hA
  • X50ug.mL.RoxvsEtOH..6h
  • X50ug.mL.RoxvsEtOH..6hA
  • X2ug.mL.SMvsEtOH..6h
  • X2ug.mL.SMvsEtOH..6hA
  • X5ug.mLStreptomycinvsEtOH.6h
  • X5ug.mLStreptomycinvsEtOH.6hA
  • X5ug.mL.TetvsEtOH..6h
  • X10ug.mL.TetvsEtOH..6h
  • H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep.1
  • H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep2
  • H37Rv.Ctrl.vs.5.ug.ml.garlic.extract.6hrs
  • H37Rv.Ctrl.vs.10.ug.ml.garlic.extract.6hrs
  • X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.y
  • Tet_20uM_30M_01
  • Tet_50ng_30M_01
  • X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A
  • X10ug.ml.capreomycin.vs.Ethanol..6hrs
  • X5ug.ml.Streptomycin.vs.Ethanol.6hrs