Bicluster

ID: 552f1701b744335b89d4b4d4
# Conditions: 227
# Genes: 30
Residual: 0.46220766524702

Bicluster Motifs

Bicluster Genes

  • Rv0115
  • Rv0161
  • Rv0318c
  • Rv0453
  • Rv1050
  • Rv1090
  • Rv1153c
  • Rv1269c
  • Rv1514c
  • Rv1669
  • Rv1723
  • Rv1729c
  • Rv1781c
  • Rv1878
  • Rv1879
  • Rv1913
  • Rv2037c
  • Rv2143
  • Rv2492
  • Rv2545
  • Rv2566
  • Rv2569c
  • Rv2607
  • Rv2723
  • Rv3007c
  • Rv3063
  • Rv3665c
  • Rv3727
  • Rv3829c

Bicluster Conditions

  • MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1
  • High.iron.wt.vs.low.iron.wt.1b
  • High.iron.wt.vs.low.iron.wt.2a
  • High.iron.wt.vs.low.iron.wt.3a
  • High.iron.wt.vs.low.iron.wt.3b
  • H37Rv.hypoxia.2hr.rep.2
  • H37Rv.hypoxia.2hr.rep.5
  • H37Rv.hypoxia.2hr.rep.6
  • NRP.Day6..2
  • NRP.Day8..1
  • NRP.Day10..1
  • NRP.Day12..1
  • NRP.Day14..3
  • NRP.Day14..5
  • NRP.Day14..8
  • NRP.Day14..9
  • pH4.8vspH6.8..2h.A
  • pH4.8vspH6.8..4h.
  • pH4.8vspH6.8..4h.A
  • pH4.8vspH6.8..4h.B
  • pH4.8vspH6.8..4h.C
  • pH4.8vspH6.8..5.5h.
  • pH4.8vspH6.8..11h.
  • pH5.2vspH6.8..2h.
  • pH5.2vspH6.8..5h.
  • pH5.2vspH6.8..10.5h.
  • pH5.2vspH6.8..11h.
  • pH5.2vspH6.8..16h.
  • pH5.6vspH6.8..2h.
  • pH5.6vspH6.8..2h.A
  • pH5.6vspH6.8..4h.
  • pH5.6vspH6.8..7h.
  • pH5.6vspH6.8..16h.
  • X4mM.H2O2vsctrl..2h.
  • X4mM.H2O2vsctrl..2h.A
  • X4mM.H2O2.ctrl..2h...2
  • X4mM.H2O2.ctrl..4h...1
  • X4mM.H2O2vsctrl..4h.
  • X4mM.H2O2vsctrl..4h.A
  • H2O2.4mM.vs.ctrl.12h.1
  • X25J.UV.ctrl..2h.
  • X25J.UVvs.ctrl..6h.
  • X40mJ.UV.ctrl..6h.
  • X60J.UV.ctrl..2h.
  • X60J.UVvsctrl..6h.
  • H37Rv.hypoxia.4hr.rep.1
  • H37Rv.hypoxia.4hr.rep.4
  • H37Rv.hypoxia.4hr.rep.5
  • H37Rv.hypoxia.4hr.rep.6
  • H37Rv.hypoxia.4hr.rep.7
  • H37Rv.hypoxia.8hr.rep.1
  • H37Rv.hypoxia.8hr.rep.2
  • H37Rv.hypoxia.8hr.rep.3
  • H37Rv.hypoxia.12hr.rep.1
  • H37Rv.hypoxia.12hr.rep.2
  • H37Rv.hypoxia.12hr.rep.3
  • H37Rv.hypoxia.1.day.rep.2
  • H37Rv.hypoxia.1.day.rep.3
  • H37Rv.hypoxia.1.day.rep.4
  • H37Rv.hypoxia.1.day.rep.5
  • H37Rv.hypoxia.1.day.rep.6
  • H37Rv.hypoxia.1.day.rep.7
  • H37Rv.hypoxia.1.day.rep.9
  • H37Rv.hypoxia.1.day.rep.10
  • H37Rv.hypoxia.4.day.rep.1
  • H37Rv.hypoxia.4.day.rep.2
  • H37Rv.hypoxia.4.day.rep.3
  • H37Rv.hypoxia.4.day.rep.4
  • H37Rv.hypoxia.4.day.rep.5
  • H37Rv.hypoxia.4.day.rep.6
  • H37Rv.hypoxia.4.day.rep.7
  • H37Rv.hypoxia.7.day.rep.1
  • H37Rv.hypoxia.7.day.rep.2
  • H37Rv.hypoxia.7.day.rep.3
  • H37Rv.hypoxia.7.day.rep.4
  • H37Rv.hypoxia.7.day.rep.6
  • H37Rv.hypoxia.7.day.rep.7
  • H37Rv.diamide.1h.rep.1
  • H37Rv.diamide.1h.rep.2
  • H37Rv.diamide.1h.rep.6
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.1
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
  • CHP_25uM_1h_01
  • Starvation_1254_OA50_12h_04
  • Starvation_1254_OA50_24h_02
  • Starvation_1254_OA50_24h_03
  • Starvation_1254_OA50_24h_04
  • Starvation_1254_OA50_3d_01
  • Starvation_1254_OA50_3d_02
  • Starvation_1254_OA50_3d_03
  • Starvation_1254_OA50_3d_04
  • Starvation_1254_OA50_5d_03
  • Starvation_1254_OA50_5d_04
  • Starvation_1254_OA50_6h_02
  • Starvation_1254_PA50_24h_03
  • Starvation_1254_PA50_24h_04
  • Starvation_1254_PA50_6h_02
  • Starvation_OA50_24h_01
  • Starvation_OA50_24h_03
  • Starvation_OA50_24h_04
  • Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
  • CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
  • BCG.2hr.phagosomal.profile
  • BCG.24hr.phagosomal.profile
  • M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
  • MTB.in.Wild.type.macrophages.for.4hrs
  • MTB.in.Wild.type.macrophages.for.24hrs
  • MTB.in.Wild.type.macrophages.for.48hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.4hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.24hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.48hrs
  • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.6
  • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.6
  • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.2
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.3
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.6
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.3
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.6
  • Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
  • Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
  • Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
  • Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
  • Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
  • Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
  • SG2.A0_N02A01c3
  • SG2.B0_N02A09c3
  • SG6.H0_N5A03cy.5
  • SG6_A0_N7A10cy.3
  • SG6_B0_N7A10cy.5
  • SG7.CT0_N11A03cy.5
  • SG7.DT0_N11A04cy.5
  • SG8.C.Day.0.pre_N27A07cy.3
  • SG.ISB.3.0B_N30A01cy.5
  • SG7.DT1_N11A08cy.5
  • SG7.CT1_N11A07cy.5
  • SG7.BT1_N11A06cy.5
  • SG7.AT1_N11A05cy.5
  • SG6_B1_N7A11cy.5
  • SG6_A1_N7A11cy.3
  • SG2.B1_N02A10c3
  • SG2.A2_N02A03c3
  • SG8.A.Day.5_N37A10cy.3
  • SG2.A5_N02A05c3
  • SG2.D7_N02A06c5
  • SG2.B7_N02A10c5
  • SG6D.T7_N11A02cy.3
  • SG7.T7B_N11A09cy.5
  • SG7.T7C_N11A10cy.5
  • SG7.T7D_N11A11cy.5
  • SG.ISB.3.7B_N30A03cy.3
  • SG.ISB.3.7D_N30A04cy.3
  • SG12.B1_N32A10cy.3
  • SG12.A2_N32A03cy.3
  • SG12.A4_N32A04cy.3
  • SG12.B4_N32A12cy.3
  • SG12.C4_N32A08cy.5
  • SG12.A6_N32A05cy.3
  • SG12.B6_N32A01cy.5
  • SG12.C6_N32A09cy.5
  • SG12.A8_N32A06cy.3
  • SG12.B8_N32A02cy.5
  • SG12.C8_N32A10cy.5
  • SG12.C24_N32A11cy.5
  • SG12.B24_N32A03cy.5
  • SG6.D8_N5A09cy.5
  • SG6.C8_N5A08cy.5
  • SG7.T8C_N11A07cy.3
  • SG.ISB.3.8A_N30A04cy.5
  • SG.ISB.3.8B_N30A05cy.3
  • SG.ISB.3.8C_N30A05cy.5
  • SG.ISB.3.8D_N30A06cy.3
  • SG2.D9_N02A08c5
  • SG6.D11_N8A09cy.5
  • SG6.C11_N5A12cy.5
  • SG.ISB.3.12A_N30A06cy.5
  • SG.ISB.3.12C_N30A07cy.5
  • SG6.B14_N8A11cy.5
  • SG6.C14_N8A12cy.5
  • WT_140mM_NaCl_Rep1
  • WT_140mM_NaCl_Rep3
  • A00470_Q1_t30_diamide
  • A00437_Q1_t30_diamide
  • A00436_Q2_t60_diamide
  • X0.2ug.mL.RifvsDMSO..6h
  • X0.2ug.mL.RifvsDMSO..6hA
  • Rif.0.5ug.mL.vsDMSO.2.5hA
  • Rif.5ug.mL.vsDMSO.2.5h
  • Rif.5ug.mL.vsDMSO.2.5hA
  • X0.1ug.mL.RifpvsEtOH..6h
  • X0.5ug.mLRifapentinevsEtOH.6h
  • X0.5ug.mLRifapentinevsEtOH.6hA
  • X5ug.ml.Rifampicin.vs.DMSO.2.5hrs