Bicluster

ID: 552f1701b744335b89d4b4d3
# Conditions: 224
# Genes: 26
Residual: 0.45056733026623

Bicluster Motifs

Bicluster Genes

  • Rv0026
  • Rv0456c
  • Rv0573c
  • Rv0601c
  • Rv0728c
  • Rv0843
  • Rv0943c
  • Rv1526c
  • Rv1552
  • Rv1917c
  • Rv1973
  • Rv2143
  • Rv2282c
  • Rv2891
  • Rv2896c
  • Rv2997
  • Rv3109
  • Rv3110
  • Rv3111
  • Rv3112
  • Rv3359
  • Rv3360
  • Rv3379c
  • Rv3427c
  • Rv3447c
  • Rv3471c

Bicluster Conditions

  • MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1
  • MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.3
  • High.iron.wt.vs.low.iron.wt.1b
  • High.iron.wt.vs.low.iron.wt.2a
  • High.iron.wt.vs.low.iron.wt.3a
  • High.iron.wt.vs.low.iron.wt.3b
  • H37Rv.hypoxia.2hr.rep.1
  • H37Rv.hypoxia.2hr.rep.4
  • NRP.Day6..2
  • NRP.Day6..3
  • NRP.Day8..1
  • NRP.Day8..2
  • NRP.Day10..2
  • NRP.Day10..3
  • NRP.Day12..1
  • NRP.Day12..3
  • NRP.Day14..4
  • pH4.8vspH6.8..5h.
  • pH4.8vspH6.8..7h.
  • pH5.2vspH6.8..11h.
  • pH5.6vspH6.8..2h.A
  • pH5.6vspH6.8..7h.
  • X4mM.H2O2vsctrl..1h.
  • X4mM.H2O2vsctrl..2h.
  • X4mM.H2O2.ctrl..4h...1
  • X4mM.H2O2vsctrl..4h.
  • X4mM.H2O2vsctrl..4h.A
  • H2O2.4mM.vs.ctrl.12h.1
  • X25J.UV.ctrl..2h.
  • X40mJ.UV.ctrl..6h.
  • UV.40J.vs.ctrl.8h.1
  • UV.40J.vs.ctrl.12h.1
  • X60J.UV.ctrl..2h.
  • UV.60J.vs.ctrl.6h.1
  • H37Rv.hypoxia.4hr.rep.2
  • H37Rv.hypoxia.4hr.rep.3
  • H37Rv.hypoxia.4hr.rep.6
  • H37Rv.hypoxia.8hr.rep.1
  • H37Rv.hypoxia.12hr.rep.2
  • H37Rv.hypoxia.1.day.rep.3
  • H37Rv.hypoxia.1.day.rep.4
  • H37Rv.hypoxia.1.day.rep.7
  • H37Rv.hypoxia.1.day.rep.9
  • H37Rv.hypoxia.4.day.rep.1
  • H37Rv.hypoxia.4.day.rep.5
  • H37Rv.hypoxia.4.day.rep.6
  • H37Rv.hypoxia.4.day.rep.7
  • H37Rv.hypoxia.7.day.rep.1
  • H37Rv.hypoxia.7.day.rep.2
  • H37Rv.hypoxia.7.day.rep.3
  • H37Rv.diamide.1h.rep.2
  • H37Rv.diamide.1h.rep.3
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.1
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
  • CHP_25uM_1h_01
  • CHP_25uM_2h_01
  • Starvation_1254_OA50_12h_02
  • Starvation_1254_OA50_24h_02
  • Starvation_1254_OA50_24h_04
  • Starvation_1254_OA50_3d_01
  • Starvation_1254_OA50_3d_02
  • Starvation_1254_OA50_3d_03
  • Starvation_1254_OA50_3d_04
  • Starvation_1254_OA50_5d_03
  • Starvation_1254_OA50_6h_01
  • Starvation_1254_OA50_6h_02
  • Starvation_1254_PA50_24h_01
  • Starvation_1254_PA50_6h_03
  • Starvation_OA50_24h_01
  • Starvation_OA50_24h_03
  • Starvation_OA50_24h_04
  • Starvation_OA50_6h_01
  • Starvation_OA50_6h_02
  • Starvation_OA50_6h_03
  • Starvation_OA50_6h_04
  • Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
  • H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
  • MTB.in.Wild.type.macrophages.for.24hrs
  • MTB.in.Wild.type.macrophages.for.48hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.4hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.24hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.48hrs
  • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.6
  • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.6
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.1
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.2
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.6
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.3
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.6
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.3
  • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.2
  • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.6
  • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.1
  • Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
  • Russell_Lab_Spotted_Oligos_1.2..14.day.resting.macrophage.infection.2hr..rep.2..Russell_Lab_Spotted_Oligos_1.2..
  • Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
  • Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
  • Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
  • Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
  • Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
  • Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
  • Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
  • Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
  • Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
  • Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
  • SG7.AT0_N11A01cy.5
  • SG7.CT0_N11A03cy.5
  • SG8.C.Day.0.pre_N27A07cy.3
  • SG.ISB.3.0A_N30A01cy.3
  • SG.ISB.3.0B_N30A01cy.5
  • SG8.C.Day.1_N37A11cy.5
  • SG8.C.Day.1_N27A09cy.3
  • SG8.B.Day.1_N37A05cy.5
  • SG8.A.Day.1_fix_N37A03cy.5
  • SG7.DT1_N11A08cy.5
  • SG7.CT1_N11A07cy.5
  • SG7.BT1_N11A06cy.5
  • SG7.AT1_N11A05cy.5
  • SG6_B1_N7A11cy.5
  • SG6_A1_N7A11cy.3
  • SG6.D1_N5A05cy.5
  • SG6.C1_N5A04cy.5
  • SG8.A.Day.2_N37A08cy.3
  • SG8.C.Day.2_N37A12cy.5
  • SG8.B.Day.2_N37A06cy.5
  • SG2.B2_N02A11c3
  • SG2.D2_N02A03c5
  • SG8.A.Day.3_N37A09cy.3
  • SG8.B.Day.3_N37A07cy.5
  • SG2.A3_N02A04c3
  • SG2.D3_N02A04c5
  • SG8.B.Day.5_N37A08cy.5
  • SG2.D7_N02A06c5
  • SG6_B7_N7A12cy.5
  • SG7.T7B_N11A09cy.5
  • SG7.T7C_N11A10cy.5
  • SG8.B.Day.7_N37A09cy.5
  • SG8.A.Day.7_N37A11cy.3
  • SG.ISB.3.7A_N30A02cy.5
  • SG.ISB.3.7B_N30A03cy.3
  • SG12.A1_N32A02cy.3
  • SG12.B1_N32A10cy.3
  • SG12.C1_N32A06cy.5
  • SG12.B2_N32A11cy.3
  • SG12.C2_N32A07cy.5
  • SG12.B4_N32A12cy.3
  • SG12.C4_N32A08cy.5
  • SG12.B6_N32A01cy.5
  • SG12.C6_N32A09cy.5
  • SG12.B8_N32A02cy.5
  • SG12.C8_N32A10cy.5
  • SG6.D8_N5A09cy.5
  • SG6.C8_N5A08cy.5
  • SG7.T8B_N11A06cy.3
  • SG7.T8D_N11A08cy.3
  • SG.ISB.3.8A_N30A04cy.5
  • SG.ISB.3.8B_N30A05cy.3
  • SG.ISB.3.8C_N30A05cy.5
  • SG.ISB.3.8D_N30A06cy.3
  • SG2.A9_N02A08c3
  • SG2.B9_N02A12c5
  • SG2.D9_N02A08c5
  • SG6.D11_N8A09cy.5
  • SG6.C11_N5A12cy.5
  • SG12.C120_N32A12cy.5
  • SG.ISB.3.12A_N30A06cy.5
  • SG.ISB.3.12C_N30A07cy.5
  • SG.ISB.3.12D_N30A08cy.3
  • WT_140mM_NaCl_Rep2
  • WT_140mM_NaCl_Rep3
  • WT_140mM_NaCl_Rep4
  • A00470_Q3_t90_diamide
  • X0.2ug.mL.RifvsDMSO..6h
  • X0.2ug.mL.RifvsDMSO..6hA
  • Rif.0.5ug.mL.vsDMSO.2.5h
  • Rif.0.5ug.mL.vsDMSO.2.5hA
  • Rif.5ug.mL.vsDMSO.2.5h
  • Rif.5ug.mL.vsDMSO.2.5hA
  • X0.1ug.mL.RifpvsEtOH..6h
  • X0.5ug.mLRifapentinevsEtOH.6h
  • X0.5ug.mLRifapentinevsEtOH.6hA
  • X5ug.ml.Rifampicin.vs.DMSO.2.5hrs