Bicluster

ID: 552f1701b744335b89d4b45d
# Conditions: 219
# Genes: 25
Residual: 0.48269501317777

Bicluster Motifs

Bicluster Genes

  • Rv0370c
  • Rv0607
  • Rv0775
  • Rv0969
  • Rv0970
  • Rv0971c
  • Rv0972c
  • Rv0974c
  • Rv0975c
  • Rv1187
  • Rv1188
  • Rv1574
  • Rv1579c
  • Rv1582c
  • Rv1734c
  • Rv1739c
  • Rv1758
  • Rv1998c
  • Rv2027c
  • Rv2270
  • Rv2340c
  • Rv2578c
  • Rv3370c
  • Rv3467
  • Rv3659c

Bicluster Conditions

  • MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2
  • High.iron.wt.vs.low.iron.wt.1b
  • High.iron.wt.vs.low.iron.wt.2b
  • H37Rv.hypoxia.2hr.rep.1
  • H37Rv.hypoxia.2hr.rep.5
  • H37Rv.hypoxia.2hr.rep.6
  • NRP.Day6..2
  • NRP.Day8..2
  • NRP.Day8..3
  • NRP.Day10..2
  • NRP.Day12..2
  • NRP.Day12..3
  • NRP.Day14..1
  • NRP.Day14..2
  • NRP.Day14..9
  • NRP.Day20..2
  • pH4.8vspH6.8..4h.
  • pH4.8vspH6.8..4h.A
  • pH4.8vspH6.8..4h.C
  • pH5.2vspH6.8..5h.
  • pH5.2vspH6.8..10.5h.
  • pH5.2vspH6.8..11h.
  • pH5.6vspH6.8..2h.
  • pH5.6vspH6.8..4h.
  • pH5.6vspH6.8..7h.
  • X4mM.H2O2vsctrl..2h.
  • X4mM.H2O2vsctrl..2h.A
  • X4mM.H2O2.ctrl..2h...2
  • X4mM.H2O2vsctrl..4h.A
  • H2O2.4mM.vs.ctrl.8h.1
  • X25J.UV.ctrl..2h.
  • X60J.UVvsctrl..6h.
  • H37Rv.hypoxia.4hr.rep.5
  • H37Rv.hypoxia.4hr.rep.6
  • H37Rv.hypoxia.4hr.rep.7
  • H37Rv.hypoxia.8hr.rep.1
  • H37Rv.hypoxia.8hr.rep.2
  • H37Rv.hypoxia.8hr.rep.3
  • H37Rv.hypoxia.12hr.rep.2
  • H37Rv.hypoxia.12hr.rep.3
  • H37Rv.hypoxia.1.day.rep.4
  • H37Rv.hypoxia.1.day.rep.5
  • H37Rv.hypoxia.1.day.rep.6
  • H37Rv.hypoxia.1.day.rep.7
  • H37Rv.hypoxia.1.day.rep.9
  • H37Rv.hypoxia.1.day.rep.10
  • H37Rv.hypoxia.4.day.rep.2
  • H37Rv.hypoxia.4.day.rep.4
  • H37Rv.hypoxia.4.day.rep.5
  • H37Rv.hypoxia.4.day.rep.6
  • H37Rv.hypoxia.7.day.rep.1
  • H37Rv.hypoxia.7.day.rep.2
  • H37Rv.hypoxia.7.day.rep.3
  • H37Rv.hypoxia.7.day.rep.5
  • H37Rv.hypoxia.7.day.rep.6
  • H37Rv.hypoxia.7.day.rep.7
  • H37Rv.diamide.1h.rep.3
  • H37Rv.diamide.1h.rep.5
  • H37Rv.diamide.1h.rep.6
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
  • CHP_25uM_1h_01
  • CHP_25uM_24h_01
  • CHP_25uM_2h_01
  • Starvation_1254_OA50_12h_02
  • Starvation_1254_OA50_24h_01
  • Starvation_1254_OA50_24h_02
  • Starvation_1254_OA50_24h_03
  • Starvation_1254_OA50_24h_04
  • Starvation_1254_OA50_3d_01
  • Starvation_1254_OA50_3d_02
  • Starvation_1254_OA50_3d_03
  • Starvation_1254_OA50_3d_04
  • Starvation_1254_OA50_5d_01
  • Starvation_1254_OA50_5d_03
  • Starvation_1254_OA50_5d_04
  • Starvation_1254_OA50_6h_02
  • Starvation_1254_OA50_6h_03
  • Starvation_1254_OA50_6h_04
  • Starvation_1254_PA50_24h_01
  • Starvation_1254_PA50_24h_02
  • Starvation_1254_PA50_24h_04
  • Starvation_1254_PA50_6h_01
  • Starvation_1254_PA50_6h_02
  • Starvation_1254_PA50_6h_03
  • Starvation_OA50_24h_01
  • Starvation_OA50_24h_02
  • Starvation_OA50_24h_03
  • Starvation_OA50_24h_04
  • Starvation_OA50_6h_02
  • Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
  • CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
  • CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
  • MTB.in.Wild.type.macrophages.for.4hrs
  • MTB.in.Wild.type.macrophages.for.24hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.4hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.24hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.48hrs
  • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.2
  • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.6
  • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.6
  • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
  • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.1
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.3
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.6
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.6
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.1
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.2
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.3
  • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.1
  • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.6
  • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.2
  • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.3
  • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.4
  • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.6
  • Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
  • Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
  • Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
  • Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
  • Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
  • Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
  • Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
  • Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
  • SG2.A0_N02A01c3
  • SG2.D0_N02A01c5
  • SG7.CT0_N11A03cy.5
  • SG8.A.Day.0.pre_fix_N37A04cy.5
  • SG8.C.Day.0.pre_N27A07cy.3
  • SG.ISB.3.0B_N30A01cy.5
  • SG8.D.Day.1_N27A12cy.3
  • SG8.B.Day.1_N37A05cy.5
  • SG7.BT1_N11A06cy.5
  • SG6.D1_N5A05cy.5
  • SG8.B.Day.2_N37A06cy.5
  • SG2.D3_N02A04c5
  • SG8.A.Day.5_N37A10cy.3
  • SG7.T7C_N11A10cy.5
  • SG12.C1_N32A06cy.5
  • SG12.B2_N32A11cy.3
  • SG12.C2_N32A07cy.5
  • SG12.B4_N32A12cy.3
  • SG12.C4_N32A08cy.5
  • SG12.C6_N32A09cy.5
  • SG2.A8_N02A07c3
  • SG2.D8_N02A07c5
  • SG6D.T8_N11A03cy.3
  • SG6.C8_N5A08cy.5
  • SG6.B8_N5A07cy.5
  • SG6.A8_N5A06cy.5
  • SG7.T8C_N11A07cy.3
  • SG7.T8B_N11A06cy.3
  • SG7.T8D_N11A08cy.3
  • SG.ISB.3.8A_N30A04cy.5
  • SG.ISB.3.8B_N30A05cy.3
  • SG.ISB.3.8C_N30A05cy.5
  • SG2.A9_N02A08c3
  • SG6.C11_N5A12cy.5
  • SG6.B11_N5A11cy.5
  • SG6.A11_N5A10cy.5
  • SG7.T12C_N11A11cy.3
  • SG7.T12A_N11A09cy.3
  • SG12.C120_N32A12cy.5
  • SG6.B14_N8A11cy.5
  • SG6.C14_N8A12cy.5
  • SG6D.T14_N11A04cy.3
  • WT_140mM_NaCl_Rep2
  • WT_140mM_NaCl_Rep3
  • WT_140mM_NaCl_Rep4
  • A00470_Q1_t30_diamide
  • A00470_Q2_t60_diamide
  • A00470_Q3_t90_diamide
  • A00437_Q1_t30_diamide
  • A00437_Q2_t60_diamide
  • A00437_Q3_t90_diamide
  • A00436_Q2_t60_diamide
  • X0.2ug.mL.RifvsDMSO..6hA
  • Rif.0.5ug.mL.vsDMSO.2.5h
  • Rif.0.5ug.mL.vsDMSO.2.5hA
  • Rif.5ug.mL.vsDMSO.2.5h
  • Rif.5ug.mL.vsDMSO.2.5hA
  • X0.1ug.mL.RifpvsEtOH..6h
  • X0.5ug.mLRifapentinevsEtOH.6h
  • X0.5ug.mLRifapentinevsEtOH.6hA
  • X5ug.ml.Rifampicin.vs.DMSO.2.5hrs