Bicluster

ID: 552f13cfb744335b89d49f16
# Conditions: 288
# Genes: 23
Residual: 0.47911062725796

Bicluster Motifs

Bicluster Genes

  • Rv0081
  • Rv0082
  • Rv0085
  • Rv0086
  • Rv0087
  • Rv0981
  • Rv1028c
  • Rv1213
  • Rv1266c
  • Rv1739c
  • Rv1742
  • Rv2003c
  • Rv2006
  • Rv2559c
  • Rv2630
  • Rv3086
  • Rv3087
  • Rv3088
  • Rv3089
  • Rv3126c
  • Rv3128c
  • Rv3467
  • Rv3896c

Bicluster Conditions

  • H37Rv.hypoxia.2hr.rep.1
  • H37Rv.hypoxia.2hr.rep.2
  • H37Rv.hypoxia.2hr.rep.3
  • NRP.Day6..1
  • NRP.Day6..3
  • NRP.Day10..3
  • NRP.Day12..2
  • NRP.Day12..3
  • NRP.Day14..1
  • NRP.Day14..2
  • NRP.Day14..3
  • NRP.Day14..4
  • NRP.Day14..6
  • NRP.Day14..7
  • NRP.Day30..1
  • pH4.8vspH6.8..2h.
  • pH4.8vspH6.8..2h.A
  • pH4.8vspH6.8..4h.
  • pH4.8vspH6.8..4h.A
  • pH4.8vspH6.8..4h.B
  • pH4.8vspH6.8..4h.C
  • pH4.8vspH6.8..5.5h.
  • pH4.8vspH6.8..7h.
  • pH4.8vspH6.8..11h.
  • pH5.2vspH6.8..2h.
  • pH5.2vspH6.8..5h.
  • pH5.2vspH6.8..5.5h.
  • pH5.2vspH6.8..11h.
  • pH5.6vspH6.8..2h.A
  • pH5.6vspH6.8..4h.
  • pH5.6vspH6.8..5h.
  • pH5.6vspH6.8..7h.
  • X0.1ug.mL.Mtmvsctrl..0.33h..x
  • X0.1ug.mL.Mtmvsctrl..0.75h..x
  • X0.1ug.mL.Mtmvsctrl..1.5h..x
  • X0.2ug.mL.Mtmvsctrl..0.33h..x
  • X0.2ug.mL.Mtmvsctrl..0.75h..x
  • X0.2ug.mL.Mtmvsctrl..1.5h..x
  • X0.2ug.mL.Mtmvsctrl..2h.B.x
  • X0.2ug.mL.Mtmvsctrl..2h.C.x
  • X0.2ug.mL.Mtmvsctrl..4h..x
  • X0.2ug.mL.Mtm.ctrl..4h...1.x
  • Mtm.0.2ug.mL.vs.ctrl.8h.1.x
  • Mtm.0.2ug.mL.vs.ctrl.12h.1.x
  • H37Rv.hypoxia.4hr.rep.2
  • H37Rv.hypoxia.4hr.rep.5
  • H37Rv.hypoxia.4hr.rep.6
  • H37Rv.hypoxia.8hr.rep.1
  • H37Rv.hypoxia.12hr.rep.1
  • H37Rv.hypoxia.12hr.rep.2
  • H37Rv.hypoxia.1.day.rep.2
  • H37Rv.hypoxia.1.day.rep.3
  • H37Rv.hypoxia.1.day.rep.4
  • H37Rv.hypoxia.1.day.rep.6
  • H37Rv.hypoxia.1.day.rep.9
  • H37Rv.hypoxia.4.day.rep.2
  • H37Rv.hypoxia.4.day.rep.3
  • H37Rv.hypoxia.4.day.rep.4
  • H37Rv.hypoxia.4.day.rep.5
  • H37Rv.hypoxia.4.day.rep.6
  • H37Rv.hypoxia.4.day.rep.7
  • H37Rv.hypoxia.7.day.rep.1
  • H37Rv.hypoxia.7.day.rep.3
  • H37Rv.hypoxia.7.day.rep.6
  • H37Rv.hypoxia.7.day.rep.7
  • X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.x
  • X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.x
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
  • Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
  • CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
  • CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Mtb.Erdman.strain.20.ppm.CO.rep.1
  • Mtb.Erdman.strain.20.ppm.CO.rep.2
  • Mtb.Erdman.strain.200.ppm.CO.rep.1
  • Mtb.Erdman.strain.200.ppm.CO.rep.2
  • Mtb.Erdman.strain.2000.ppm.CO.rep.2
  • Mtb.response.to.pH.5.5..6.replicates.
  • BCG.2hr.phagosomal.profile
  • BCG.24hr.phagosomal.profile
  • Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
  • Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
  • Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
  • Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
  • Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
  • SG8.A.Day.0.pre_fix_N37A04cy.5
  • SG8.C.Day.0.pre_N27A07cy.3
  • SG8.C.Day.1_N27A09cy.3
  • SG8.B.Day.1_N37A05cy.5
  • SG6.D1_N5A05cy.5
  • SG6.C1_N5A04cy.5
  • SG2.D1_N02A02c5
  • SG8.C.Day.2_N37A12cy.5
  • SG8.B.Day.2_N37A06cy.5
  • SG2.A2_N02A03c3
  • SG8.A.Day.5_N37A10cy.3
  • SG8.B.Day.5_N37A08cy.5
  • SG6_B7_N7A12cy.5
  • SG8.A.Day.7_N37A11cy.3
  • SG.ISB.3.7A_N30A02cy.5
  • SG.ISB.3.7D_N30A04cy.3
  • SG12.B0_N32A09cy.3
  • SG12.A1_N32A02cy.3
  • SG12.B1_N32A10cy.3
  • SG12.A2_N32A03cy.3
  • SG12.A4_N32A04cy.3
  • SG12.B4_N32A12cy.3
  • SG12.A6_N32A05cy.3
  • SG12.C6_N32A09cy.5
  • SG12.A24_N32A07cy.3
  • SG2.B8_N02A11c5
  • SG6D.T8_N11A03cy.3
  • SG6.C8_N5A08cy.5
  • SG.ISB.3.8A_N30A04cy.5
  • SG2.B9_N02A12c5
  • SG2.D9_N02A08c5
  • SG6.D11_N8A09cy.5
  • SG6.B11_N5A11cy.5
  • SG6.A11_N5A10cy.5
  • SG7.T12D_N11A12cy.3
  • SG7.T12C_N11A11cy.3
  • SG12.B120_N32A04cy.5
  • SG12.A120_N32A08cy.3
  • SG.ISB.3.12A_N30A06cy.5
  • SG6.A14_N8A10cy.5
  • SG6.B14_N8A11cy.5
  • SG6.C14_N8A12cy.5
  • SG6D.T14_N11A04cy.3
  • WT_140mM_NaCl_Rep1
  • WT_140mM_NaCl_Rep2
  • WT_140mM_NaCl_Rep4
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1
  • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.2
  • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.2
  • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.4
  • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.2
  • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.4
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.4
  • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.2
  • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3
  • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.4
  • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.1
  • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.1
  • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.3
  • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.4
  • MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.1
  • MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.2
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.3
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.5
  • MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.2
  • MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.3
  • MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.4
  • MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.2
  • MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.3
  • MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.4
  • MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.2
  • MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.3
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.1
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.2
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.3
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.4
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.1
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.3
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.2
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.3
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.2
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.3
  • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.1
  • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.2
  • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.3
  • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.4
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.1
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.3
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.4
  • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.1
  • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.2
  • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.3
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.1
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.2
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.3
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.2
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.3
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.4
  • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.1
  • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.2
  • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.3
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.1
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.3
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.4
  • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.1
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.2
  • X20ug.mL.Prcp.6776.DMSO..6h..1
  • X20ug.mL.Procept.6776vsDMSO..6h
  • X30ug.mLProcept6776vsDMSO.6hA
  • X5ug.mLProcept.6778vsDMSO.6hA
  • X20ug.mL.Prcp.6778.DMSO..6h..1
  • X20ug.mLProcept6778vsDMSO.6h
  • X20ug.mLProcept6778vsDMSO.6hA
  • X20ug.mLProcept6778vsDMSO.6hB
  • X40ug.mLProcept6778vsDMSO.6h
  • X10ug.mL.PA.1vsDMSO..6h
  • X10ug.mL.PA.1vsDMSO..6hA
  • X0.2ug.mL.PA824.DMSO..6h..1
  • X0.1ug.mL.Mtmvsctrl..0.33h..y
  • X0.1ug.mL.Mtmvsctrl..0.75h..y
  • X0.1ug.mL.Mtmvsctrl..1.5h..y
  • X0.2ug.mL.Mtmvsctrl..0.33h..y
  • X0.2ug.mL.Mtmvsctrl..0.75h..y
  • X0.2ug.mL.Mtmvsctrl..1.5h..y
  • X0.2ug.mL.Mtmvsctrl..2h.B.y
  • X0.2ug.mL.Mtmvsctrl..2h.C.y
  • X0.2ug.mL.Mtmvsctrl..4h..y
  • X0.2ug.mL.Mtmvsctrl..4h.B.y
  • X0.2ug.mL.Mtm.ctrl..4h...1.y
  • X0.2ug.mL.Mtm.ctrl..4h...2.y
  • Mtm.0.2ug.mL.vs.ctrl.8h.1.y
  • Mtm.0.2ug.mL.vs.ctrl.8h.2.y
  • Mtm.0.2ug.mL.vs.ctrl.12h.1.y
  • X5ug.mL.AmivsEtOH..6h
  • X10ug.mL.CapvsEtOH..6h
  • X10ug.mL.capreomycinvsEtOH..6h
  • X1mM.DTNBvsDMSO..6h
  • X2mM.DTNBvsDMSO
  • X10ug.mL.LevovsEtOH..6h
  • X10ug.mL.LevovsEtOH..6hA
  • X10ug.mL.methoxatinvsDMSO..6h.A
  • X10ug.mLMethoxatinvsDMSO.6h
  • X2mMb.mercaptoethanolvsDMSO.6h
  • X10ug.mL.Nvb.DMSO..6h..1
  • X10ug.mL.Nvb.DMSO..6h..2
  • X10ug.mL.Nvb.DMSO..6h..3
  • X10ug.mL.OfloxvsDMSO..6h
  • X10ug.mL.OfloxvsDMSO..6hA
  • X30ug.mL.RoxvsEtOH..6h
  • X50ug.mL.RoxvsEtOH..6h
  • X50ug.mL.RoxvsEtOH..6hA
  • X2ug.mL.SMvsEtOH..6h
  • X2ug.mL.SMvsEtOH..6hA
  • X5ug.mLStreptomycinvsEtOH.6h
  • X5ug.mLStreptomycinvsEtOH.6hA
  • X5ug.mL.TetvsEtOH..6h
  • X10ug.mL.TetvsEtOH..6h
  • X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.y
  • X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.x
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4
  • Tet_20uM_30M_01
  • Tet_500ng_30M_01
  • X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A
  • X5ug.ml.Streptomycin.vs.Ethanol.6hrs
  • MTB.at.T0..biological.rep1
  • MTB.at.T0..biological.rep3
  • MTB.at.T0..biological.rep4
  • MTB.at.T30..biological.rep1
  • MTB.at.T30..biological.rep2
  • MTB.at.T30..biological.rep3
  • MTB.at.T60..biological.rep1
  • MTB.at.T60..biological.rep2
  • MTB.at.T180..biological.rep1
  • MTB.at.T180..biological.rep2
  • MTB.at.T180..biological.rep3
  • MTB.at.T180..biological.rep4
  • MTB.at.T360..biological.rep4