Bicluster


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Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0001399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19537193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19997197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.29037718136get_template_part( ).../page.php:28
60.29037718712locate_template( ).../general-template.php:206
70.29037718840load_template( ).../template.php:720
80.29047719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.29117736328the_content( ).../content-page.php:22
100.29137736576apply_filters( ).../post-template.php:256
110.29137736976WP_Hook->apply_filters( ).../plugin.php:205
120.29227742504do_shortcode( ).../class-wp-hook.php:310
130.29237748560preg_replace_callback ( ).../shortcodes.php:273
140.29237749184do_shortcode_tag( ).../shortcodes.php:273
150.29237749184bicluster_info_shortcode( ).../shortcodes.php:433
160.29247749384file_get_contents ( ).../short_codes.php:666

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Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0001399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19537193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19997197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.29037718136get_template_part( ).../page.php:28
60.29037718712locate_template( ).../general-template.php:206
70.29037718840load_template( ).../template.php:720
80.29047719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.29117736328the_content( ).../content-page.php:22
100.29137736576apply_filters( ).../post-template.php:256
110.29137736976WP_Hook->apply_filters( ).../plugin.php:205
120.29227742504do_shortcode( ).../class-wp-hook.php:310
130.29237748560preg_replace_callback ( ).../shortcodes.php:273
140.29237749184do_shortcode_tag( ).../shortcodes.php:273
150.29237749184bicluster_info_shortcode( ).../shortcodes.php:433

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Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0001399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19537193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19997197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.29037718136get_template_part( ).../page.php:28
60.29037718712locate_template( ).../general-template.php:206
70.29037718840load_template( ).../template.php:720
80.29047719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.29117736328the_content( ).../content-page.php:22
100.29137736576apply_filters( ).../post-template.php:256
110.29137736976WP_Hook->apply_filters( ).../plugin.php:205
120.29227742504do_shortcode( ).../class-wp-hook.php:310
130.29237748560preg_replace_callback ( ).../shortcodes.php:273
140.29237749184do_shortcode_tag( ).../shortcodes.php:273
150.29237749184bicluster_info_shortcode( ).../shortcodes.php:433

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Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0001399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19537193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19997197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.29037718136get_template_part( ).../page.php:28
60.29037718712locate_template( ).../general-template.php:206
70.29037718840load_template( ).../template.php:720
80.29047719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.29117736328the_content( ).../content-page.php:22
100.29137736576apply_filters( ).../post-template.php:256
110.29137736976WP_Hook->apply_filters( ).../plugin.php:205
120.29227742504do_shortcode( ).../class-wp-hook.php:310
130.29237748560preg_replace_callback ( ).../shortcodes.php:273
140.29237749184do_shortcode_tag( ).../shortcodes.php:273
150.29237749184bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'num_genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 671
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0001399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19537193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19997197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.29037718136get_template_part( ).../page.php:28
60.29037718712locate_template( ).../general-template.php:206
70.29037718840load_template( ).../template.php:720
80.29047719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.29117736328the_content( ).../content-page.php:22
100.29137736576apply_filters( ).../post-template.php:256
110.29137736976WP_Hook->apply_filters( ).../plugin.php:205
120.29227742504do_shortcode( ).../class-wp-hook.php:310
130.29237748560preg_replace_callback ( ).../shortcodes.php:273
140.29237749184do_shortcode_tag( ).../shortcodes.php:273
150.29237749184bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'residual' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 672
Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0001399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19537193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19997197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.29037718136get_template_part( ).../page.php:28
60.29037718712locate_template( ).../general-template.php:206
70.29037718840load_template( ).../template.php:720
80.29047719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.29117736328the_content( ).../content-page.php:22
100.29137736576apply_filters( ).../post-template.php:256
110.29137736976WP_Hook->apply_filters( ).../plugin.php:205
120.29227742504do_shortcode( ).../class-wp-hook.php:310
130.29237748560preg_replace_callback ( ).../shortcodes.php:273
140.29237749184do_shortcode_tag( ).../shortcodes.php:273
150.29237749184bicluster_info_shortcode( ).../shortcodes.php:433
ID:
# Conditions:
# Genes:
Residual:

Bicluster Motifs

Bicluster Genes

  • Rv0235c
  • Rv0373c
  • Rv0647c
  • Rv1054
  • Rv1510
  • Rv1796
  • Rv1798
  • Rv1864c
  • Rv1907c
  • Rv2510c
  • Rv2538c
  • Rv2540c
  • Rv2544
  • Rv2592c
  • Rv2612c
  • Rv2825c
  • Rv2828c
  • Rv2973c
  • Rv2974c
  • Rv3014c
  • Rv3072c
  • Rv3422c
  • Rv3430c
  • Rv3693

Bicluster Conditions

  • Strain.CDC1551..replicate.1
  • Strain.CDC1551..replicate.2
  • Strain.1254...replicate.3
  • Strain.1843..replicate.1
  • Strain.1843...replicate.2
  • Strain.1843...replicate.3
  • Strain.1843..replicate.4
  • Strain.3160..replicate.1
  • Strain.3160...replicate.3
  • Strain.3160..replicate.4
  • Strain.9700665..replicate.1
  • Strain.9700665..replicate.4
  • Strain.9800608..replicate.4
  • Strain.9802501..replicate1
  • Strain.9802826..replicate.3
  • Strain.M3061a..replicate.1
  • Strain.M3061a..replicate.2
  • H37Rv.Vs.M.bovis.rep1
  • H37Rv.Vs.M.bovis.rep2
  • H37Rv.Vs.M.bovis.rep3
  • H37Rv.Vs.M.bovis.rep4
  • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
  • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
  • H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
  • Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
  • Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
  • Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
  • Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
  • Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
  • Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
  • Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
  • Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
  • Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
  • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.1
  • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2
  • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.5
  • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.6
  • X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.x
  • CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.3
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.4
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.1
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.2
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.4
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.5
  • hip.mutant.KL2825..biological.rep1
  • hip.mutant.KL2825..biological.rep2
  • hip.mutant.KL2849..biological.rep1
  • hip.mutant.KL2849..biological.rep2
  • hip.mutant.HTS1090..biological.rep1
  • hip.mutant.HTS1090..biological.rep2
  • hip.mutant.HTS1105..biological.rep1
  • hip.mutant.HT1116..biological.rep2
  • hip.mutant.HT1117..biological.rep1
  • hip.mutant.HT1134..biological.rep1
  • hip.mutant.HT1134..biological.rep2
  • hip.mutant.HT1170..biological.rep1
  • hip.mutant.HT1170..biological.rep2
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.1
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.2
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.3
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4
  • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.1
  • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.3
  • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.2
  • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.4
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.1
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.2
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.3
  • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.1
  • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.1
  • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.2
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.3
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.4
  • MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.1
  • MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.2
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.5
  • MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.1
  • MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.3
  • MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.4
  • MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.4
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.1
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.3
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.2
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.4
  • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.1
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.1
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.3
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.4
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.2
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.3
  • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.1
  • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.2
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.1
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.2
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.3
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.4
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.1
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.2
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.3
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.4
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.5
  • X5ug.mL.AmivsEtOH..6h
  • X5ug.mL.AmivsEtOH..6hA
  • X10ug.mL.Amikacin.EtOH..6h
  • X5ug.mL.CapvsEtOH..6h
  • X10ug.mL.CapvsEtOH..6h
  • X10ug.mL.capreomycinvsEtOH..6h
  • X10ug.mL.RoxvsEtOH..6h
  • X10ug.mL.RoxvsEtOH..6hA
  • X30ug.mL.RoxvsEtOH..6hA
  • X50ug.mL.RoxvsEtOH..6h
  • X50ug.mL.RoxvsEtOH..6hA
  • X2ug.mL.SMvsEtOH..6h
  • X2ug.mL.SMvsEtOH..6hA
  • X5ug.mLStreptomycinvsEtOH.6h
  • X5ug.mL.TetvsEtOH..6h
  • Tet_20uM_30M_01
  • Tet_500ng_30M_01
  • Tet_50ng_30M_01
  • Tet_5ug_30M_01
  • X10ug.ml.capreomycin.vs.Ethanol..6hrs