Bicluster


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Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.26057193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.26507197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.43797718136get_template_part( ).../page.php:28
60.43797718712locate_template( ).../general-template.php:206
70.43797718840load_template( ).../template.php:720
80.43807719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.43927736328the_content( ).../content-page.php:22
100.43957736576apply_filters( ).../post-template.php:256
110.43957736976WP_Hook->apply_filters( ).../plugin.php:205
120.44107742504do_shortcode( ).../class-wp-hook.php:310
130.44127748560preg_replace_callback ( ).../shortcodes.php:273
143.29487761576do_shortcode_tag( ).../shortcodes.php:273
153.29497762048bicluster_genes_shortcode( ).../shortcodes.php:433
163.29507762552file_get_contents ( ).../short_codes.php:15
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Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.26057193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.26507197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.43797718136get_template_part( ).../page.php:28
60.43797718712locate_template( ).../general-template.php:206
70.43797718840load_template( ).../template.php:720
80.43807719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.43927736328the_content( ).../content-page.php:22
100.43957736576apply_filters( ).../post-template.php:256
110.43957736976WP_Hook->apply_filters( ).../plugin.php:205
120.44107742504do_shortcode( ).../class-wp-hook.php:310
130.44127748560preg_replace_callback ( ).../shortcodes.php:273
143.29487761576do_shortcode_tag( ).../shortcodes.php:273
153.29497762048bicluster_genes_shortcode( ).../shortcodes.php:433
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Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.26057193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.26507197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.43797718136get_template_part( ).../page.php:28
60.43797718712locate_template( ).../general-template.php:206
70.43797718840load_template( ).../template.php:720
80.43807719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.43927736328the_content( ).../content-page.php:22
100.43957736576apply_filters( ).../post-template.php:256
110.43957736976WP_Hook->apply_filters( ).../plugin.php:205
120.44107742504do_shortcode( ).../class-wp-hook.php:310
130.44127748560preg_replace_callback ( ).../shortcodes.php:273
143.29487761576do_shortcode_tag( ).../shortcodes.php:273
153.29497762048bicluster_genes_shortcode( ).../shortcodes.php:433
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Call Stack
#TimeMemoryFunctionLocation
10.0000398720{main}( ).../index.php:0
20.0000399000require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.26057193632require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.26507197376include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.43797718136get_template_part( ).../page.php:28
60.43797718712locate_template( ).../general-template.php:206
70.43797718840load_template( ).../template.php:720
80.43807719152require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.43927736328the_content( ).../content-page.php:22
100.43957736576apply_filters( ).../post-template.php:256
110.43957736976WP_Hook->apply_filters( ).../plugin.php:205
120.44107742504do_shortcode( ).../class-wp-hook.php:310
130.44127748560preg_replace_callback ( ).../shortcodes.php:273
143.29487761576do_shortcode_tag( ).../shortcodes.php:273
153.29497762048bicluster_genes_shortcode( ).../shortcodes.php:433
ID: 552f0344b744335b89d43337
# Conditions: 105
# Genes: 16
Residual: 0.33001052364916

Bicluster Motifs

Bicluster Genes

    Bicluster Conditions

    • Strain.CDC1551..replicate.1
    • Strain.CDC1551..replicate.4
    • Strain.1006...replicate.1
    • Strain.1006...replicate.2
    • Strain.1006...replicate.4
    • Strain.1843..replicate.1
    • Strain.1843...replicate.2
    • Strain.3160..replicate.1
    • Strain.3160..replicate.2
    • Strain.3160...replicate.3
    • Strain.3160..replicate.4
    • Strain.9700665..replicate.1
    • Strain.9700665..replicate.2
    • Strain.9700665..replicate.4
    • Strain.9800608..replicate.1
    • Strain.9800608..replicate.2
    • Strain.9800608...replicate.3
    • Strain.9800608..replicate.4
    • Strain.9802501..replicate1
    • Strain.9802501..replicate.3
    • Strain.9802826..replicate.1
    • Strain.9802826..replicate.2
    • Strain.9802826..replicate.4
    • Strain.M3061a..replicate.1
    • Strain.M3061a..replicate.2
    • Strain.M3061a..replicate.3
    • Strain.M3061a..replicate.4
    • H37Rv.Vs.M.bovis.rep1
    • H37Rv.Vs.M.bovis.rep2
    • H37Rv.Vs.M.bovis.rep3
    • H37Rv.Vs.M.bovis.rep4
    • MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.2
    • MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.3
    • MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.2
    • MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.3
    • MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.5
    • H37Rv.0.2..Oxygen..2h..1
    • H37Rv.0.2..Oxygen..2h..2
    • H37Rv.0.2..Oxygen..2h..3
    • H37Rv.0.2..Oxygen..2h..4
    • H37Rv.0.2..Oxygen..2h..5
    • H37Rv.0.2..Oxygen..2h..6
    • H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.6
    • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
    • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
    • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
    • H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
    • Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
    • Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
    • Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
    • Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
    • Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
    • Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
    • Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
    • Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
    • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.1
    • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2
    • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.5
    • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.6
    • Whole.Lung.Surfactant.2hrs.rep.2
    • Extracted.Lung.Surfactant.30min.rep.2
    • Extracted.Lung.Surfactant.30min.rep.4
    • Purified.Surfactant.Lipids.2hrs.rep.1
    • Purified.Surfactant.Lipids.30min.rep.1
    • Purified.Human.SP.A.Coated.2hrs.rep1
    • Purified.Human.SP.A.Uncoated.2hrs.rep2
    • Purified.Human.SP.A.Uncoated.2hrs.rep4
    • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.1
    • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.2
    • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3
    • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1
    • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.2
    • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.3
    • CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.2
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.2
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.4
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.1
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.2
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.4
    • Mtb.Erdman.strain.20.ppm.CO.rep.1
    • Mtb.Erdman.strain.20.ppm.CO.rep.2
    • Mtb.Erdman.strain.200.ppm.CO.rep.2
    • Mtb.Erdman.strain.2000.ppm.CO.rep.1
    • Mtb.Erdman.strain.2000.ppm.CO.rep.2
    • hip.mutant.KL2801..biological.rep1
    • hip.mutant.KL2801..biological.rep2
    • hip.mutant.KL2825..biological.rep1
    • hip.mutant.KL2825..biological.rep2
    • hip.mutant.KL2849..biological.rep1
    • hip.mutant.KL2849..biological.rep2
    • hip.mutant.HTS1090..biological.rep1
    • hip.mutant.HTS1090..biological.rep2
    • hip.mutant.HTS1105..biological.rep1
    • hip.mutant.HTS1105..biological.rep2
    • hip.mutant.HT1117..biological.rep2
    • hip.mutant.HT1120..biological.rep2
    • hip.mutant.HT1170..biological.rep1