Bicluster

ID: 552f01a6b744335b89d42793
# Conditions: 202
# Genes: 21
Residual: 0.51725187948039

Bicluster Motifs

Bicluster Genes

  • Rv0452
  • Rv0680c
  • Rv0750
  • Rv0946c
  • Rv1004c
  • Rv1259
  • Rv1267c
  • Rv1468c
  • Rv1740
  • Rv1818c
  • Rv2286c
  • Rv2319c
  • Rv2320c
  • Rv2322c
  • Rv2323c
  • Rv2324
  • Rv2634c
  • Rv2695
  • Rv3507
  • Rv3590c
  • Rv3674c

Bicluster Conditions

  • Strain.1006...replicate.2
  • Strain.1254...replicate.3
  • Strain.3160..replicate.2
  • Strain.9700665..replicate.1
  • Strain.9700665..replicate.2
  • Strain.9800608..replicate.1
  • Strain.9800608..replicate.2
  • Strain.9802501..replicate1
  • Strain.9802501..replicate.4
  • Strain.9802826..replicate.1
  • Strain.9802826..replicate.2
  • H37Rv.Vs.M.bovis.rep1
  • H37Rv.Vs.M.bovis.rep2
  • H37Rv.0.05..SDS.exposure.for.1h.rep.2
  • H37Rv.0.05..SDS.exposure.for.1h.rep.3
  • H37Rv.0.05..SDS.exposure.for.1h.rep.6
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.x
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.x
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.3
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1.x
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2.x
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3.x
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4.x
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.3.x
  • H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3
  • H37Rv.vs..H37Rv.SDS.treated.rep.2
  • H37Rv.vs..H37Rv.SDS.treated.rep.3
  • H37Rv.vs..H37Rv.SDS.treated.rep.4
  • H37Rv.vs..H37Rv.SDS.treated.rep.5
  • H37Rv.vs..H37Rv.SDS.treated.rep.6
  • pH4.8vspH6.8..2h.
  • pH4.8vspH6.8..2h.B
  • pH4.8vspH6.8..4h.A
  • pH4.8vspH6.8..5h.
  • pH4.8vspH6.8..5.5h.
  • pH4.8vspH6.8..6h.
  • pH4.8vspH6.8..7h.
  • pH5.2vspH6.8..2h.
  • pH5.2vspH6.8..5h.
  • pH5.2vspH6.8..10.5h.
  • pH5.2vspH6.8..11h.
  • pH5.2vspH6.8..16h.
  • pH5.6vspH6.8..2h.
  • pH5.6vspH6.8..2h.A
  • pH5.6vspH6.8..4h.
  • pH5.6vspH6.8..7h.
  • pH5.6vspH6.8..16h.
  • X0.1mM.GSNO.DMSO..3.5h
  • X0.1mM.GSNO.DMSO..6h
  • X0.1mM.GSNOvsDMSO..6h.
  • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
  • H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
  • Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
  • Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
  • Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
  • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.1
  • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2
  • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.4
  • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.5
  • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.6
  • H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.2
  • H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.3
  • H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4
  • H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.5
  • Whole.Lung.Surfactant.2hrs.rep.1
  • Whole.Lung.Surfactant.2hrs.rep.2
  • Whole.Lung.Surfactant.2hrs.rep.3
  • Whole.Lung.Surfactant.30min.rep.1
  • Whole.Lung.Surfactant.30min.rep.3
  • Whole.Lung.Surfactant.30min.rep.4
  • Whole.Lung.Surfactant.30min.rep.5
  • Extracted.Lung.Surfactant.2hrs.rep.1
  • Extracted.Lung.Surfactant.2hrs.rep.2
  • Extracted.Lung.Surfactant.30min.rep.1
  • Extracted.Lung.Surfactant.30min.rep.2
  • Extracted.Lung.Surfactant.30min.rep.3
  • Extracted.Lung.Surfactant.30min.rep.4
  • Purified.Surfactant.Lipids.2hrs.rep.2
  • Purified.Surfactant.Lipids.30min.rep.1
  • Purified.Surfactant.Lipids.30min.rep.2
  • Purified.Human.SP.A.Coated.2hrs.rep2
  • Purified.Human.SP.A.Uncoated.2hrs.rep1
  • Purified.Human.SP.A.Uncoated.2hrs.rep4
  • MTB1254_SDS_90MIN_01
  • MTB1254_SDS_90MIN_04
  • SDS_3h_01
  • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.1
  • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3
  • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.3
  • Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
  • CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
  • CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.4
  • Mtb.response.to.pH.5.5..6.replicates.
  • Mtb.response.to.pH.6.5..6.replicates.
  • BCG.2hr.phagosomal.profile
  • BCG.24hr.phagosomal.profile
  • M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
  • M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
  • MTB.in.Wild.type.macrophages.for.4hrs
  • MTB.in.Wild.type.macrophages.for.24hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.4hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.24hrs
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2.y
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.y
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3.y
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.7
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.3
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1.y
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2.y
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3.y
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2.y
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.3.y
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4.y
  • MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.4
  • Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
  • Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
  • Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
  • Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
  • Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
  • Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
  • Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
  • Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
  • Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
  • Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
  • Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
  • WT_140mM_NaCl_Rep2
  • WT_140mM_NaCl_Rep3
  • hip.mutant.HTS1090..biological.rep2
  • hip.mutant.HTS1105..biological.rep1
  • hip.mutant.HT1116..biological.rep1
  • hip.mutant.HT1116..biological.rep2
  • hip.mutant.HT1117..biological.rep1
  • hip.mutant.HT1120..biological.rep2
  • hip.mutant.HT1134..biological.rep1
  • hip.mutant.HT1170..biological.rep1
  • hip.mutant.HT1170..biological.rep2