Bicluster – MTB EGRIN 2.0

ID: 552effafb744335b89d41872
# Conditions: 164
# Genes: 32
Residual: 0.44979461083302

Bicluster Motifs

Bicluster Genes

Rv0130
Rv0214
Rv0343
Rv0397
Rv0399c
Rv0448c
Rv0449c
Rv1039c
Rv1062
Rv1131
Rv1186c
Rv1270c
Rv1290c
Rv1375
Rv1549
Rv1550
Rv1572c
Rv1682
Rv1702c
Rv1933c
Rv2014
Rv2251
Rv2481c
Rv2767c
Rv2817c
Rv2820c
Rv2823c
Rv2834c
Rv2873
Rv2874
Rv2875
Rv3845

Bicluster Conditions

H37Rv.hypoxia.2hr.rep.1
H37Rv.hypoxia.2hr.rep.2
H37Rv.hypoxia.2hr.rep.4
H37Rv.hypoxia.2hr.rep.5
NRP.Day6..1
NRP.Day6..2
NRP.Day6..3
NRP.Day8..1
NRP.Day8..2
NRP.Day8..3
NRP.Day10..2
NRP.Day10..3
NRP.Day12..1
NRP.Day12..2
NRP.Day12..3
NRP.Day14..2
NRP.Day14..3
NRP.Day14..4
NRP.Day14..5
NRP.Day14..7
NRP.Day14..8
NRP.Day14..9
NRP.Day20..2
NRP.Day30..1
pH4.8vspH6.8..2h.A
pH4.8vspH6.8..2h.B
pH4.8vspH6.8..4h.
pH4.8vspH6.8..4h.A
pH4.8vspH6.8..4h.C
pH4.8vspH6.8..11h.
pH5.2vspH6.8..5h.
pH5.2vspH6.8..10.5h.
pH5.2vspH6.8..11h.
pH5.2vspH6.8..16h.
pH5.6vspH6.8..2h.A
pH5.6vspH6.8..4h.B
pH5.6vspH6.8..5h.
pH5.6vspH6.8..11h.
H37Rv.hypoxia.4hr.rep.4
H37Rv.hypoxia.4hr.rep.6
H37Rv.hypoxia.4hr.rep.7
H37Rv.hypoxia.8hr.rep.3
H37Rv.hypoxia.12hr.rep.2
H37Rv.hypoxia.12hr.rep.3
H37Rv.hypoxia.1.day.rep.3
H37Rv.hypoxia.1.day.rep.4
H37Rv.hypoxia.1.day.rep.5
H37Rv.hypoxia.1.day.rep.7
H37Rv.hypoxia.1.day.rep.10
H37Rv.hypoxia.4.day.rep.7
H37Rv.hypoxia.7.day.rep.3
H37Rv.hypoxia.7.day.rep.5
H37Rv.hypoxia.7.day.rep.6
aceatate.induction.1
aceatate.induction.2
Acetate.3mM.10m.01
Acetate.3mM.10m.03
Acetate.3mM.10m.05
Acetate.3mM.10m.06
Acetate.3mM.10m.07
Acetate.3mM.10m_04
Acetate.3mM.2h.01
Acetate.3mM.2h.02
Acetate.3mM.2h.03
Acetate.3mM.2h.04
Acetate.3mM.2h.05
Acetate.3mM.2h.06
Acetate.3mM.30m.01
Acetate.3mM.30m.02
Acetate.3mM.30m.03
Acetate.3mM.30m.04
Acetate.3mM.30m.05
Acetate.3mM.30m.06
Acetate.3mM.30m.07
Acetate.3mM.30m.08
Acetate.3mM.60m.01
Acetate.3mM.60m.02
Acetate.3mM.60m.03
Acetate.3mM.60m.04
Starvation_1254_12h_03
Starvation_1254_12h_04
Starvation_1254_24h_01
Starvation_1254_24h_02
Starvation_1254_24h_03
Starvation_1254_24h_05
Starvation_1254_24h_06
Starvation_1254_24h_07
Starvation_1254_24h_08
Starvation_1254_3d_01
Starvation_1254_3d_02
Starvation_1254_3d_03
Starvation_1254_3d_04
Starvation_1254_5d_01
Starvation_1254_5d_02
Starvation_1254_5d_03
Starvation_1254_6h_01
Starvation_1254_6h_02
Starvation_1254_6h_03
Starvation_1254_6h_04
Starvation_1254_6h_06
Starvation_1254_6h_07
Starvation_1254_6h_08
Starvation_1254_OA50_12h_02
Starvation_1254_OA50_12h_03
Starvation_1254_OA50_12h_04
Starvation_1254_OA50_24h_01
Starvation_1254_OA50_24h_02
Starvation_1254_OA50_24h_03
Starvation_1254_OA50_24h_04
Starvation_1254_OA50_3d_01
Starvation_1254_OA50_3d_02
Starvation_1254_OA50_3d_03
Starvation_1254_OA50_3d_04
Starvation_1254_OA50_5d_01
Starvation_1254_OA50_5d_02
Starvation_1254_OA50_5d_03
Starvation_1254_OA50_5d_04
Starvation_1254_OA50_6h_02
Starvation_1254_OA50_6h_03
Starvation_1254_OA50_6h_04
Starvation_1254_PA50_24h_01
Starvation_1254_PA50_24h_02
Starvation_1254_PA50_24h_03
Starvation_1254_PA50_24h_04
Starvation_1254_PA50_6h_01
Starvation_1254_PA50_6h_02
Starvation_1254_PA50_6h_03
Starvation_1254_PA50_6h_04
Starvation_OA50_24h_01
Starvation_OA50_24h_03
Starvation_OA50_24h_04
Starvation_OA50_6h_03
Starvation_OA50_6h_04
SG7.BT0_N11A02cy.5
SG8.C.Day.0.pre_N27A07cy.3
SG8.C.Day.1_N37A11cy.5
SG8.C.Day.1_N27A09cy.3
SG8.D.Day.1_N27A12cy.3
SG8.B.Day.1_N37A05cy.5
SG8.A.Day.1_fix_N37A03cy.5
SG7.CT1_N11A07cy.5
SG7.BT1_N11A06cy.5
SG7.AT1_N11A05cy.5
SG6_B1_N7A11cy.5
SG6_A1_N7A11cy.3
SG6.C1_N5A04cy.5
SG8.A.Day.2_N37A08cy.3
SG8.C.Day.2_N37A12cy.5
SG8.B.Day.2_N37A06cy.5
SG8.A.Day.3_N37A09cy.3
SG8.B.Day.3_N37A07cy.5
SG8.B.Day.5_N37A08cy.5
SG7.T7B_N11A09cy.5
SG7.T7C_N11A10cy.5
SG7.T7D_N11A11cy.5
SG8.B.Day.7_N37A09cy.5
SG.ISB.3.7A_N30A02cy.5
SG.ISB.3.7B_N30A03cy.3
SG.ISB.3.7C_N30A03cy.5
SG12.C0_N32A05cy.5
SG12.B0_N32A09cy.3
SG12.A0_N32A01cy.3
SG6.D8_N5A09cy.5
SG2.D9_N02A08c5

Column members cluster 552effafb744335b89d41872 Species (TODO)

H37Rv.hypoxia.2hr.rep.1
H37Rv.hypoxia.2hr.rep.2
H37Rv.hypoxia.2hr.rep.4
H37Rv.hypoxia.2hr.rep.5
NRP.Day6..1
NRP.Day6..2
NRP.Day6..3
NRP.Day8..1
NRP.Day8..2
NRP.Day8..3
NRP.Day10..2
NRP.Day10..3
NRP.Day12..1
NRP.Day12..2
NRP.Day12..3
NRP.Day14..2
NRP.Day14..3
NRP.Day14..4
NRP.Day14..5
NRP.Day14..7
NRP.Day14..8
NRP.Day14..9
NRP.Day20..2
NRP.Day30..1
pH4.8vspH6.8..2h.A
pH4.8vspH6.8..2h.B
pH4.8vspH6.8..4h.
pH4.8vspH6.8..4h.A
pH4.8vspH6.8..4h.C
pH4.8vspH6.8..11h.
pH5.2vspH6.8..5h.
pH5.2vspH6.8..10.5h.
pH5.2vspH6.8..11h.
pH5.2vspH6.8..16h.
pH5.6vspH6.8..2h.A
pH5.6vspH6.8..4h.B
pH5.6vspH6.8..5h.
pH5.6vspH6.8..11h.
H37Rv.hypoxia.4hr.rep.4
H37Rv.hypoxia.4hr.rep.6
H37Rv.hypoxia.4hr.rep.7
H37Rv.hypoxia.8hr.rep.3
H37Rv.hypoxia.12hr.rep.2
H37Rv.hypoxia.12hr.rep.3
H37Rv.hypoxia.1.day.rep.3
H37Rv.hypoxia.1.day.rep.4
H37Rv.hypoxia.1.day.rep.5
H37Rv.hypoxia.1.day.rep.7
H37Rv.hypoxia.1.day.rep.10
H37Rv.hypoxia.4.day.rep.7
H37Rv.hypoxia.7.day.rep.3
H37Rv.hypoxia.7.day.rep.5
H37Rv.hypoxia.7.day.rep.6
aceatate.induction.1
aceatate.induction.2
Acetate.3mM.10m.01
Acetate.3mM.10m.03
Acetate.3mM.10m.05
Acetate.3mM.10m.06
Acetate.3mM.10m.07
Acetate.3mM.10m_04
Acetate.3mM.2h.01
Acetate.3mM.2h.02
Acetate.3mM.2h.03
Acetate.3mM.2h.04
Acetate.3mM.2h.05
Acetate.3mM.2h.06
Acetate.3mM.30m.01
Acetate.3mM.30m.02
Acetate.3mM.30m.03
Acetate.3mM.30m.04
Acetate.3mM.30m.05
Acetate.3mM.30m.06
Acetate.3mM.30m.07
Acetate.3mM.30m.08
Acetate.3mM.60m.01
Acetate.3mM.60m.02
Acetate.3mM.60m.03
Acetate.3mM.60m.04
Starvation_1254_12h_03
Starvation_1254_12h_04
Starvation_1254_24h_01
Starvation_1254_24h_02
Starvation_1254_24h_03
Starvation_1254_24h_05
Starvation_1254_24h_06
Starvation_1254_24h_07
Starvation_1254_24h_08
Starvation_1254_3d_01
Starvation_1254_3d_02
Starvation_1254_3d_03
Starvation_1254_3d_04
Starvation_1254_5d_01
Starvation_1254_5d_02
Starvation_1254_5d_03
Starvation_1254_6h_01
Starvation_1254_6h_02
Starvation_1254_6h_03
Starvation_1254_6h_04
Starvation_1254_6h_06
Starvation_1254_6h_07
Starvation_1254_6h_08
Starvation_1254_OA50_12h_02
Starvation_1254_OA50_12h_03
Starvation_1254_OA50_12h_04
Starvation_1254_OA50_24h_01
Starvation_1254_OA50_24h_02
Starvation_1254_OA50_24h_03
Starvation_1254_OA50_24h_04
Starvation_1254_OA50_3d_01
Starvation_1254_OA50_3d_02
Starvation_1254_OA50_3d_03
Starvation_1254_OA50_3d_04
Starvation_1254_OA50_5d_01
Starvation_1254_OA50_5d_02
Starvation_1254_OA50_5d_03
Starvation_1254_OA50_5d_04
Starvation_1254_OA50_6h_02
Starvation_1254_OA50_6h_03
Starvation_1254_OA50_6h_04
Starvation_1254_PA50_24h_01
Starvation_1254_PA50_24h_02
Starvation_1254_PA50_24h_03
Starvation_1254_PA50_24h_04
Starvation_1254_PA50_6h_01
Starvation_1254_PA50_6h_02
Starvation_1254_PA50_6h_03
Starvation_1254_PA50_6h_04
Starvation_OA50_24h_01
Starvation_OA50_24h_03
Starvation_OA50_24h_04
Starvation_OA50_6h_03
Starvation_OA50_6h_04
SG7.BT0_N11A02cy.5
SG8.C.Day.0.pre_N27A07cy.3
SG8.C.Day.1_N37A11cy.5
SG8.C.Day.1_N27A09cy.3
SG8.D.Day.1_N27A12cy.3
SG8.B.Day.1_N37A05cy.5
SG8.A.Day.1_fix_N37A03cy.5
SG7.CT1_N11A07cy.5
SG7.BT1_N11A06cy.5
SG7.AT1_N11A05cy.5
SG6_B1_N7A11cy.5
SG6_A1_N7A11cy.3
SG6.C1_N5A04cy.5
SG8.A.Day.2_N37A08cy.3
SG8.C.Day.2_N37A12cy.5
SG8.B.Day.2_N37A06cy.5
SG8.A.Day.3_N37A09cy.3
SG8.B.Day.3_N37A07cy.5
SG8.B.Day.5_N37A08cy.5
SG7.T7B_N11A09cy.5
SG7.T7C_N11A10cy.5
SG7.T7D_N11A11cy.5
SG8.B.Day.7_N37A09cy.5
SG.ISB.3.7A_N30A02cy.5
SG.ISB.3.7B_N30A03cy.3
SG.ISB.3.7C_N30A03cy.5
SG12.C0_N32A05cy.5
SG12.B0_N32A09cy.3
SG12.A0_N32A01cy.3
SG6.D8_N5A09cy.5
SG2.D9_N02A08c5