Corem

Corem 271

Condition Blocks

  • All
  • aromatic amides - antitubercular drugs
  • limited nutrients
  • low pH

Genes

NameCommon NameLinksDescriptionStartStopStrandChromosome

Enriched in 370 Conditions

Name
H37Rv..7H9.roll.replicate.1.x
H37Rv..7H9.roll.replicate.3.x
H37Rv..7H9.roll.replicate.4.x
Strain.CDC1551..replicate.3
Strain.CDC1551..replicate.4
Strain.9800608..replicate.2
Strain.9800608..replicate.4
Strain.9802501..replicate.3
H37Rv.Vs.M.bovis.rep1
MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.7.x
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.1
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.3
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.x
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.x
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.x
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.1
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.2
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.3
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.4
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.1
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.3
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.3
MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4.x
MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4.x
MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.3
H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1
H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3
MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.6
MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.3
H37Rv.vs..H37Rv.SDS.treated.rep.3
H37Rv.vs..H37Rv.SDS.treated.rep.5
H37Rv.hypoxia.2hr.rep.5
H37Rv.Day.0.rep.2
H37Rv.Day24.3
H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1
H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2
H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.3
H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.4
H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.5
NRP.Day6..1
NRP.Day6..3
NRP.Day8..1
NRP.Day8..2
pH4.8vspH6.8..2h.B
pH4.8vspH6.8..4h.
pH4.8vspH6.8..4h.A
pH4.8vspH6.8..4h.C
pH4.8vspH6.8..5h.
pH4.8vspH6.8..5.5h.
pH4.8vspH6.8..6h.
pH4.8vspH6.8..11h.
pH5.2vspH6.8..5h.
pH5.2vspH6.8..10.5h.
pH5.2vspH6.8..11h.
pH5.2vspH6.8..16h.
pH5.6vspH6.8..4h.
pH5.6vspH6.8..4h.B
pH5.6vspH6.8..5h.
pH5.6vspH6.8..11h.
X0.1mM.GSNO.DMSO..3.5h
X0.1mM.GSNO.DMSO..6h
X0.1mM.GSNOvsDMSO..6h.
X0.1ug.mL.Mtmvsctrl..0.33h..x
X0.1ug.mL.Mtmvsctrl..0.75h..x
X0.1ug.mL.Mtmvsctrl..1.5h..x
X0.2ug.mL.Mtmvsctrl..0.33h..x
X0.2ug.mL.Mtmvsctrl..0.75h..x
X0.2ug.mL.Mtmvsctrl..1.5h..x
X0.2ug.mL.Mtmvsctrl..2h.A.x
X0.2ug.mL.Mtmvsctrl..2h.B.x
X0.2ug.mL.Mtmvsctrl..2h.C.x
X0.2ug.mL.Mtmvsctrl..4h.B.x
X0.2ug.mL.Mtmvsctrl..6h..x
Mtm.0.2ug.mL.vs.ctrl.8h.2.x
X4mM.H2O2vsctrl..1h.
X4mM.H2O2.ctrl..2h...2
X4mM.H2O2.ctrl..4h...1
X4mM.H2O2.ctrl..4h...2
H2O2.4mM.vs.ctrl.12h.1
Succinate.7H9.based.medium..1
Succinate.7H9.based.medium..2
UV.20J.vs.ctrl.8h.1
X25J.UV.ctrl..2h.
X25J.UVvs.ctrl..6h.
X60J.UV.ctrl..2h.
H37Rv.hypoxia.1.day.rep.4
H37Rv.hypoxia.4.day.rep.3
H37Rv.hypoxia.4.day.rep.7
H37Rv.hypoxia.7.day.rep.2
H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
H37Rv.wild.type.Vs.H37Rv.wild.type.rep.1
H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2
H37Rv.wild.type.Vs.H37Rv.wild.type.rep.5
H37Rv.wild.type.Vs.H37Rv.wild.type.rep.6
H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.1
H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.2
H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.3
H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4
H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.5
H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.6
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.1
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5
Whole.Lung.Surfactant.30min.rep.1
Purified.Human.SP.A.Uncoated.2hrs.rep4
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
AA_30uM_10.min_04
AA_30uM_1h_02
AA_30uM_1h_08
AA_30uM_30min_05
AA_30uM_30min_09
AA_30uM_4h_03
aceatate.induction.1
aceatate.induction.3
Acetate.3mM.10m.06
Acetate.3mM.2h.05
Acetate.3mM.2h.06
Acetate.3mM.30m.02
CHP_25uM_2h_01
L2A_30uM_1h_04
L2A_30uM_30min_07
MTB1254_SDS_90MIN_02
OA_50uM_2h_02
OA_50uM_2h_03
OA_50uM_2h_06
OA_50uM_2h_07
OA_50uM_2h_08
OA_50uM_2h_10
OA_50uM_4h_02
OA_50uM_4h_04
OA_50uM_4h_05
PA_100uM_24h_01
PA_100uM_2h_04
PA_50uM_12h_03
PA_50uM_12h_04
PA_50uM_1h_02
PA_50uM_2h_04
PA_50uM_4h
PA_50uM_4h_01
PA_50uM_4h_02
PA_50uM_8h_02
PA_50uM_8h_03
PA_50uM_8h_04
Starvation_1254_12h_01
Starvation_1254_12h_02
Starvation_1254_12h_03
Starvation_1254_12h_04
Starvation_1254_24h_02
Starvation_1254_24h_03
Starvation_1254_24h_04
Starvation_1254_24h_05
Starvation_1254_24h_06
Starvation_1254_24h_07
Starvation_1254_24h_08
Starvation_1254_3d_01
Starvation_1254_3d_02
Starvation_1254_3d_03
Starvation_1254_3d_04
Starvation_1254_5d_01
Starvation_1254_5d_02
Starvation_1254_5d_03
Starvation_1254_5d_04
Starvation_1254_6h_01
Starvation_1254_6h_02
Starvation_1254_6h_03
Starvation_1254_6h_04
Starvation_1254_6h_05
Starvation_1254_6h_06
Starvation_1254_6h_07
Starvation_1254_6h_08
Starvation_1254_OA50_12h_02
Starvation_1254_OA50_12h_03
Starvation_1254_OA50_12h_04
Starvation_1254_OA50_24h_01
Starvation_1254_OA50_24h_02
Starvation_1254_OA50_24h_03
Starvation_1254_OA50_24h_04
Starvation_1254_OA50_3d_02
Starvation_1254_OA50_3d_03
Starvation_1254_OA50_3d_04
Starvation_1254_OA50_5d_01
Starvation_1254_OA50_5d_02
Starvation_1254_OA50_5d_03
Starvation_1254_OA50_5d_04
Starvation_1254_OA50_6h_02
Starvation_1254_OA50_6h_03
Starvation_1254_OA50_6h_04
Starvation_1254_PA50_24h_01
Starvation_1254_PA50_24h_03
Starvation_1254_PA50_24h_04
Starvation_OA50_24h_01
Starvation_OA50_24h_02
CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.1
CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.3
CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.1
CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.2
CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.1
CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3
CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.3
CDC1551.Ctrl.vs.H37Rv.rep.3
Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3
H37Rv.reaeration.for.1hrs.rep.5
H37Rv.reaeration.for.1hrs.rep.6
H37Rv.reaeration.for.4hrs.rep.5
H37Rv.reaeration.for.4hrs.rep.6
H37Rv.reaeration.for.6hrs.rep.4
H37Rv.reaeration.for.6hrs.rep.5
H37Rv.reaeration.for.12hrs.rep.5
H37Rv.reaeration.for.24hrs.rep.5
H37Rv.reaeration.for.24hrs.rep.6
Mtb.response.to.pH.5.5..6.replicates.
BCG.2hr.phagosomal.profile
M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
MTB.in.Wild.type.macrophages.for.4hrs
MTB.in.Wild.type.macrophages...IFNg.for.4hrs
MTB.in.Wild.type.macrophages...IFNg.for.48hrs
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.y
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.y
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.y
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.6
MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4.y
MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.1
MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.6
MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4.y
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.2
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.1
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.2
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.3
MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.3
MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.4
MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.5
SG6.H0_N5A03cy.5
SG6_A0_N7A10cy.3
SG6_B0_N7A10cy.5
SG7.DT1_N11A08cy.5
SG7.CT1_N11A07cy.5
SG2.B1_N02A10c3
SG2.A1_N02A02c3
SG8.B.Day.5_N37A08cy.5
SG6D.T7_N11A02cy.3
SG6C.T7_N11A01cy.3
SG7.T7C_N11A10cy.5
SG8.B.Day.7_N37A09cy.5
SG8.A.Day.7_N37A11cy.3
SG.ISB.3.7A_N30A02cy.5
SG.ISB.3.7C_N30A03cy.5
SG.ISB.3.7D_N30A04cy.3
SG12.A1_N32A02cy.3
SG12.B1_N32A10cy.3
SG12.C1_N32A06cy.5
SG12.A2_N32A03cy.3
SG12.B2_N32A11cy.3
SG12.C2_N32A07cy.5
SG12.A4_N32A04cy.3
SG12.B4_N32A12cy.3
SG12.A6_N32A05cy.3
SG12.B6_N32A01cy.5
SG12.A8_N32A06cy.3
SG12.B8_N32A02cy.5
SG2.A9_N02A08c3
SG2.B9_N02A12c5
SG6.D11_N8A09cy.5
SG12.C120_N32A12cy.5
SG6.A14_N8A10cy.5
SG6.B14_N8A11cy.5
SG6.C14_N8A12cy.5
SS_A1_RV.2
wild.type..mc.2.6020...biological.rep1
wild.type..mc.2.6020...biological.rep2
hip.mutant.KL2801..biological.rep1
hip.mutant.KL2801..biological.rep2
hip.mutant.KL2825..biological.rep2
hip.mutant.KL2849..biological.rep1
hip.mutant.KL2849..biological.rep2
hip.mutant.HTS1090..biological.rep1
hip.mutant.HTS1090..biological.rep2
hip.mutant.HTS1105..biological.rep1
hip.mutant.HTS1105..biological.rep2
hip.mutant.HT1116..biological.rep1
hip.mutant.HT1120..biological.rep1
hip.mutant.HT1130..biological.rep1
hip.mutant.HT1134..biological.rep1
hip.mutant.HT1134..biological.rep2
hip.mutant.HT1137..biological.rep2
hip.mutant.HT1170..biological.rep1
hip.mutant.HT1170..biological.rep2
A00437_Q1_t30_diamide
MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.1
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.3
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4
MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.4
MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.3
MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.1
MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.5
X1ug.mL..109vsDMSO..6hA
X1ug.mL..241vsDMSO..6h
X20ug.mL.Prcp.6778.DMSO..6h..1
X20ug.mL.Prcp.6778.DMSO..6h..2
X2ug.mL..111895vsDMSO..6h
X2ug.mL..111895vsDMSO..6hA
X2ug.mL..111895vsDMSO..6hB
X40ug.mL.5CL.pH5.6..2h..1
X40ug.mL.5CL.pH5.6..4h..1
X40ug.mL.5CL.pH5.6..4h..2
X40ug.mL.5CL.pH5.6..4h..3
X80ug.mL.5CL.pH5.6..2h.
X0.12mg.mL.BZA.pH5.6..2h.
X0.12mg.mL.BZAvspH5.6..5h.
X0.12mg.mL.Nam.pH5.6..2h..1
X0.12mg.mL.Nam.pH5.6..2h..2
X0.12mg.mL.Nam.pH5.6..4h..1
X0.12mg.mL.Nam.pH5.6..4h..2
X0.12mg.mL.NamvspH5.6..4h.
X0.12mg.mL.NamvspH5.6..5.5h.
X0.12mg.mL.NamvspH5.6..7h.
X1.2mg.mL.NamvspH5.6..5h.
X0.12mg.mL.PZA.pH5.6..2h.
X0.12mg.mL.PZA.pH5.6..4h..1
X0.12mg.mL.PZA.pH5.6..4h..2
X0.12mg.mL.PZAvspH5.6..4h.
X0.12mg.mL.PZAvspH5.6..4h.A
X0.12mg.mL.PZA.pH5.6..5h.
X0.12mg.mL.PZAvspH5.6..5.5h.
X0.12mg.mL.PZAvspH5.6..6h.
X0.12mg.mL.PZAvspH5.6..6h.A
X0.12mg.mL.PZAvspH5.6..11h.
X1.2mg.mL.PZA.pH5.6..5h.
X1.2mg.mL.PZAvspH5.6..7h.
X1.2mg.mL.PZAvspH5.6..7h.A
X0.1mMGSNO.10ug.mLmdvsDMSO.6hA
X25ug.mLCPZ.0.1mMGSNO.DMSO..2
X24ug.mL.Econazole.DMSO..6h..2
X10ug.mL.clofazimine.DMSO..6h
X100ug.mL.Cephalexin.Ctrl..6h
X100ug.mL.Ceph.DMSO..6h
X10ug.mL.ChlorprovsEtOH
X10ug.mL.ChlorprovsEtOH..6h
X24ug.mL.cltrmazole.DMS..6h..2
X50uM.CCCP.DMSO..6h..2
X200uM.Dipyridylvsctrl..6h
X2mM.DTNBvsDMSO
X9ug.mLAscidideminNpvsDMSO.6h
X5ug.mL.OfloxvsEtOH..6h
X5ug.mL.OfloxvsEtOH..6hA
X10ug.mL.OfloxvsDMSO..6h
X130ug.mL.TLMvsDMSO..6h
X130ug.mL.TLMvsDMSO..6hA
X0.13mg.mL.TLMvsDMSO..6h
X0.2mg.mL.TLMvsEtOH..6hA
X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.1
X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.1
X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.2
X130ug.ml.TLM.vs.DMSO.6hrs.rep.1
X130ug.ml.TLM.vs.DMSO.6hrs.rep.2
X0.2mg.ml.Ampicillin.vs.Ethanol.6hrs
CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1
CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1
CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.2
CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.2

Enriched in 1 Functional Category

Nameq-value
regulatory proteins0.005565081

Enriched in 3 Condition Blocks

Nameq-value
aromatic amides - antitubercular drugs1.98E-11
limited nutrients6.8E-9
low pH2.87E-7

Enriched in 4 GREs

GREMotifMotif e-valueq-value
169.2E-163.08E-65
24201.45E-10
61N/A-2.4E-12
410.000261.54E-14