Corem

Corem 151

Condition Blocks

  • All
  • reaeration
  • others - antitubercular drugs
  • DNA damage
  • oxidative stress

Genes

NameCommon NameLinksDescriptionStartStopStrandChromosome

Enriched in 301 Conditions

Name
Strain.1006...replicate.2
Strain.1006...replicate.4
Strain.1843..replicate.1
Strain.M3061a..replicate.1
H37Rv.Vs.M.bovis.rep2
H37Rv.Vs.M.bovis.rep4
MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.x
MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.x
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.1
MTB.strain.1254.Ctrl.vs.high.aeration.rep1
MTB.strain.1254.Ctrl.vs.high.aeration.rep3
CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.4
CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.5
MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.5
H37Rv.vs..H37Rv.SDS.treated.rep.2
H37Rv.vs..H37Rv.SDS.treated.rep.4
H37Rv.vs..H37Rv.SDS.treated.rep.5
MTB1254.vs..MTB1254.rep4
H37Rv.hypoxia.2hr.rep.4
WT.t.0h.WT.t.6h..1
WT.t.0h.WT.t.6h..2
pH4.8vspH6.8..2h.
pH4.8vspH6.8..4h.B
pH5.2vspH6.8..16h.
pH5.6vspH6.8..2h.
X0.2ug.mL.Mtmvsctrl..2h.B.x
X0.2ug.mL.Mtmvsctrl..4h.B.x
Mtm.0.2ug.mL.vs.ctrl.8h.1.x
PBS.Tween.7H9
UV.40J.vs.ctrl.8h.1
UV.40J.vs.ctrl.12h.1
H37Rv.hypoxia.4hr.rep.2
H37Rv.hypoxia.8hr.rep.3
H37Rv.hypoxia.12hr.rep.3
H37Rv.hypoxia.1.day.rep.2
H37Rv.hypoxia.1.day.rep.4
H37Rv.hypoxia.1.day.rep.5
H37Rv.hypoxia.1.day.rep.10
H37Rv.hypoxia.7.day.rep.2
H37Rv.hypoxia.7.day.rep.3
H37Rv.hypoxia.7.day.rep.5
H37Rv.diamide.1h.rep.5
Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
H37Rv.wild.type.Vs.H37Rv.wild.type.rep.1
H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2
H37Rv.wild.type.Vs.H37Rv.wild.type.rep.5
H37Rv.wild.type.Vs.H37Rv.wild.type.rep.6
H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.1
H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.2
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
Whole.Lung.Surfactant.30min.rep.4
Extracted.Lung.Surfactant.30min.rep.1
Extracted.Lung.Surfactant.30min.rep.3
H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
AA_30uM_1h_02
AA_30uM_1h_06
AA_30uM_2h_05
AA_30uM_2h_06
AA_30uM_2h_07
AA_30uM_30min_06
AA_60uM_24h_03
Acetate.3mM.10m.01
Acetate.3mM.10m.03
Acetate.3mM.2h.06
Acetate.3mM.30m.01
Acetate.3mM.30m.03
CHP_25uM_2h_01
Glucose_5mM_10min_01
L2A_30uM_2h_01
L2A_30uM_2h_03
L2A_30uM_30min_01
L2A_30uM_30min_02
LAA_50uM_10min_01
OA_50uM_1h_10
OA_50uM_2h_04
OA_50uM_2h_08
OA_50uM_30min_02
PA_50uM_12h_05
PA_50uM_1h_12
PA_50uM_24h_04
PA_50uM_24h_06
PA_50uM_24h_07
PA_50uM_24h_10
PA_50uM_30min_03
PA_50uM_3d_01
PA_50uM_3d_02
PA_50uM_3d_03
PA_50uM_3d_04
PA_50uM_3d_05
PA_50uM_3d_06
PA_50uM_8h_03
PA_50uM_8h_05
Starvation_1254_12h_01
Starvation_1254_3d_02
Starvation_1254_6h_01
Starvation_1254_6h_05
Starvation_1254_OA50_24h_02
Starvation_1254_OA50_24h_03
Starvation_1254_OA50_24h_04
Starvation_OA50_24h_01
Starvation_OA50_24h_02
H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3
H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1
H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.3
CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2
CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.2
CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.2
Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.1
H37Rv.reaeration.for.1hrs.rep.1
H37Rv.reaeration.for.1hrs.rep.3
H37Rv.reaeration.for.1hrs.rep.5
H37Rv.reaeration.for.4hrs.rep.4
H37Rv.reaeration.for.4hrs.rep.7
H37Rv.reaeration.for.4hrs.rep.8
H37Rv.reaeration.for.6hrs.rep.1
H37Rv.reaeration.for.6hrs.rep.3
H37Rv.reaeration.for.6hrs.rep.4
H37Rv.reaeration.for.12hrs.rep.3
H37Rv.reaeration.for.24hrs.rep.1
H37Rv.reaeration.for.24hrs.rep.3
Mtb.Erdman.strain.2000.ppm.CO.rep.2
MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2.y
MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.y
MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.y
MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.y
MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.3
MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.4
MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.4
MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.1
MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.3
MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.4
MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.5
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.1
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.2
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.3
MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.1
MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.2
MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.2
MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.3
MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.4
MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.5
MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.6
Russell_Lab_Spotted_Oligos_1.2..14.day.resting.macrophage.infection.2hr..rep.2..Russell_Lab_Spotted_Oligos_1.2..
Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
SG2.A0_N02A01c3
SG2.D0_N02A01c5
SG6_A0_N7A10cy.3
SG8.C.Day.0.pre_N27A07cy.3
SG8.C.Day.1_N37A11cy.5
SG8.C.Day.1_N27A09cy.3
SG8.D.Day.1_N27A12cy.3
SG7.DT1_N11A08cy.5
SG7.CT1_N11A07cy.5
SG2.D1_N02A02c5
SG2.B1_N02A10c3
SG2.A1_N02A02c3
SG2.A5_N02A05c3
SG7.T7C_N11A10cy.5
SG12.C2_N32A07cy.5
SG12.A4_N32A04cy.3
SG12.B4_N32A12cy.3
SG2.B9_N02A12c5
SG6.B11_N5A11cy.5
SG6.A11_N5A10cy.5
SG12.A120_N32A08cy.3
SG.ISB.3.12B_N30A07cy.3
SG.ISB.3.12C_N30A07cy.5
SG.ISB.3.12D_N30A08cy.3
SG6.B14_N8A11cy.5
SS_A1_RV.1
SS_A1_RV.3
WT_140mM_NaCl_Rep1
hip.mutant.HTS1105..biological.rep1
hip.mutant.HT1116..biological.rep2
A00436_Q3_t90_diamide
MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.1
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.3
MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.1
MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.3
MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1
MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.1
MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.1
MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.1
MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.2
MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.4
MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.5
X10ug.mL..109.DMSO..6h
X20ug.mL.Prcp.6776.DMSO..6h..1
X40ug.mLProcept6778vsDMSO.6h
X1ug.mL..124196vsDMSO..6h
X10ug.mL.PA.1vsDMSO..6h
X10ug.mL.PA.1vsDMSO..6hA
X10ug.mL.PA.1vsDMSO..6hB
X50ug.mL.PA.1vsDMSO..6h
X10ug.mL.PA.21vsDMSO..6h
X10ug.mL.PA.21vsDMSO..6hA
X0.2ug.mL.PA824.DMSO..6h..1
X0.2ug.mL.PA824.DMSO..6h..2
X0.4ug.mL.PA824.DMSO..6h..2
X0.4ug.mL.PA824.DMSO..6h..3
X0.4ug.mL.PA824.DMSO..6h..4
X2ug.mL.PA824.DMSO..6h..1
X2ug.mL.PA824.DMSO..6h..2
X80ug.mL.5CL.pH5.6..2h.
X0.12mg.mL.PZAvspH5.6..11h.
X10ug.mL.EconazolevsEtOH..6h
X24ug.mL.Econazole.DMSO..6h..2
X20ug.mL.ethambutol.DMSO
X0.32ug.mL.CervsEtOH..6h
X0.32ug.mL.CervsEtOH..6hA
X0.5ug.mL.CervsEtOH..6hA
X0.5ug.mL.CeruleninvsDMSO..6hA
X0.5ug.mL.CeruleninvsDMSO..6hB
X20ug.mL.Cephalexin.Ctrl..6h..1
X20ug.mL.Cephalexin.Ctrl..6h..2
X100ug.mL.Ceph.DMSO..6h
X10ug.mLchlorpromazinevsctrl.6h
X20ug.mL.chlorprmz.DMSO..6h..2
X60ug.mL.ChlorprovsEtOH..6h
X24ug.mL.cltrmazole.DMS..6h..1
X24ug.mL.cltrmazole.DMS..6h..3
X5ug.mL.CapvsEtOH..6h
X5ug.mL.CapvsEtOH..6hA
X20uM.DCCD.DMSO..6h..2
X5ug.mL.KCN.DMSO..6h..1
X5ug.mL.KCN.DMSO..6h..2
X20ug.mL.KCN.DMSO..6h
X10ug.mL.LevovsEtOH..6hA
X10ug.mL.OfloxvsDMSO..6hA
X0.2ug.mL.RifvsDMSO..6hA
X10ug.mL.TRZ.DMSO..6h..1
X10ug.mL.TRZ.DMSO..6h..2
X25ug.mL.TRZ.DMSO..6h
X50ug.mL.Thioridazine.DMSO..6h
H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep2
X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.y
X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.y
X20ug.ml.KCN.vs.DMSO.6hrs.y
X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1
X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.x
X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3
X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4
X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.x
X2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.x
X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2
X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.1
X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.2
X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.1
X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.2
X130ug.ml.TLM.vs.DMSO.6hrs.rep.1
X130ug.ml.TLM.vs.DMSO.6hrs.rep.2
X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.1
X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.2
X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.1
X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.2
X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.4
X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.1
X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.2
X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.y
X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.y
X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A
X10ug.ml.capreomycin.vs.Ethanol..6hrs
CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.2
H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.2
H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.1
MTB.at.T30..biological.rep1
MTB.at.T30..biological.rep2
MTB.at.T60..biological.rep2
MTB.at.T180..biological.rep1

Enriched in 2 Functional Categories

Nameq-value
cell wall & cell processes0.001380177
PE/PPE0.009954887

Enriched in 5 Condition Blocks

Nameq-value
reaeration0.00014283
others - antitubercular drugs4.75E-6
lipids - carbon source0.007682956
DNA damage0.001250186
oxidative stress0.000452564

Enriched in 1 GRE

GREMotifMotif e-valueq-value
421.5E-860.000922288