Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0110
• Rv0134
• Rv0142
• Rv0216
• Rv0221
• Rv0258c
• Rv0376c
• Rv0576
• Rv0582
• Rv0658c
• Rv0663
• Rv0838
• Rv1034c
• Rv1123c
• Rv1147
• Rv1718
• Rv1739c
• Rv1741
• Rv2026c
• Rv3166c
• Rv3366

Bicluster Conditions

• H37Rv..7H9.roll.replicate.1.x
• H37Rv..7H9.roll.replicate.2.x
• H37Rv..7H9.roll.replicate.3.x
• H37Rv..7H9.roll.replicate.4.x
• H37Rv..7H9.shake.replicate.1
• H37Rv..7H9.shake.replicate.2
• H37Rv..7H9.shake.replicate.3
• H37Rv..7H9.shake.replicate.4
• H37Rv..Dubos.media.replicate.1
• H37Rv..Dubos.media.replicate.2
• H37Rv..Dubos.media.replicate.3
• H37Rv..Sauton.s.media.replicate.2
• H37Rv..Sauton.s.media.replicate.3
• H37Rv..Youman.media.replicate.1
• H37Rv..Youman.media.replicate.3
• H37Rv..Youman.media.replicate.4
• H37Rv..7H9.roll.replicate.1.y
• H37Rv..7H9.roll.replicate.3.y
• H37Rv..7H9.roll.replicate.4.y
• MTB1254.Day.0.rep.1
• MTB1254.Day.0.rep.2
• MTB1254.Day.0.rep.3
• High.iron.wt.vs.low.iron.wt.3b
• MTB1254.vs..MTB1254.rep1
• MTB1254.vs..MTB1254.rep4
• MTB1254.vs..MTB1254.rep5
• MTB1254.vs..MTB1254.rep6
• H37Rv.Day6.1
• H37Rv.Day6.2
• WT.t.6h.WT.t.0h..1
• WT.t.0h.WT.t.6h..1
• WT.t.0h.WT.t.6h..2
• pH4.8vspH6.8..2h.A
• pH4.8vspH6.8..2h.B
• pH4.8vspH6.8..4h.A
• pH4.8vspH6.8..7h.
• pH5.2vspH6.8..5h.
• pH5.2vspH6.8..10.5h.
• pH5.2vspH6.8..16h.
• pH5.6vspH6.8..2h.
• pH5.6vspH6.8..4h.
• pH5.6vspH6.8..5h.
• pH5.6vspH6.8..7h.
• pH5.6vspH6.8..16h.
• Mtm.0.2ug.mL.vs.ctrl.12h.1.x
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
• AA_30uM_10m_01
• AA_30uM_10min_02
• AA_30uM_10min_03
• AA_30uM_1h_04
• AA_30uM_1h_06
• AA_30uM_1h_08
• AA_30uM_24h_02
• AA_30uM_24h_03
• AA_30uM_24h_04
• AA_30uM_2h_01
• AA_30uM_2h_02
• AA_30uM_2h_03
• AA_30uM_2h_05
• AA_30uM_2h_06
• AA_30uM_2h_09
• AA_30uM_30min_01
• AA_30uM_30min_02
• AA_30uM_30min_05
• AA_30uM_30min_06
• AA_30uM_30min_07
• AA_30uM_30min_08
• AA_30uM_30min_09
• AA_30uM_4h_04
• AA_30uM_4h_06
• AA_3uM_10min_02
• AA_60uM_24h_02
• AA_60uM_24h_03
• aceatate.induction.2
• Acetate.3mM.10m.02
• Acetate.3mM.10m.03
• Acetate.3mM.10m.05
• Acetate.3mM.10m_04
• Acetate.3mM.2h.03
• Acetate.3mM.2h.04
• Acetate.3mM.2h.05
• Acetate.3mM.2h.06
• Acetate.3mM.30m.01
• Acetate.3mM.30m.05
• Acetate.3mM.30m.06
• Acetate.3mM.30m.08
• Acetate.3mM.60m.04
• L2A_30uM_10min_04
• L2A_30uM_10min_05
• L2A_30uM_10min_06
• L2A_30uM_10min_08
• L2A_30uM_1h_01
• L2A_30uM_1h_02
• L2A_30uM_1h_03
• L2A_30uM_1h_05
• L2A_30uM_1h_08
• L2A_30uM_2h_02
• L2A_30uM_2h_04
• L2A_30uM_30min_03
• L2A_30uM_30min_04
• L2A_30uM_30min_07
• L2A_30uM_4h_03
• L2A_30uM_4h_05
• LAA_50uM_10min_02
• OA_50uM_10min_03
• OA_50uM_10min_07
• OA_50uM_10min_08
• OA_50uM_1h_01
• OA_50uM_1h_05
• OA_50uM_1h_07
• OA_50uM_1h_08
• OA_50uM_1h_09
• OA_50uM_1h_10
• OA_50uM_24h_03
• OA_50uM_24h_06
• OA_50uM_2h_02
• OA_50uM_2h_03
• OA_50uM_2h_04
• OA_50uM_2h_07
• OA_50uM_2h_08
• OA_50uM_2h_09
• OA_50uM_30min_04
• OA_50uM_30min_05
• OA_50uM_30min_07
• OA_50uM_30min_08
• OA_50uM_30min_09
• OA_50uM_4h_02
• OA_50uM_4h_04
• OA_50uM_4h_06
• PA_100uM_2h_04
• PA_5.uM_10min_02
• PA_50uM_10.min_03
• PA_50uM_10min_04
• PA_50uM_10min_08
• PA_50uM_10min_09
• PA_50uM_12h_03
• PA_50uM_1h_07
• PA_50uM_1h_10
• PA_50uM_1h_11
• PA_50uM_1h_12
• PA_50uM_24h_02
• PA_50uM_24h_04
• PA_50uM_24h_06
• PA_50uM_24h_07
• PA_50uM_24h_09
• PA_50uM_2h_01
• PA_50uM_2h_02
• PA_50uM_2h_04
• PA_50uM_2h_06
• PA_50uM_30.min_05
• PA_50uM_30.min_06
• PA_50uM_30.min_07
• PA_50uM_30min_02
• PA_50uM_30min_03
• PA_50uM_30min_08
• PA_50uM_30min_09
• PA_50uM_30min_10
• PA_50uM_30min_11
• PA_50uM_3d_01
• PA_50uM_3d_02
• PA_50uM_3d_04
• PA_50uM_3d_05
• PA_50uM_4h_01
• PA_50uM_4h_02
• PA_50uM_4h_04
• PA_50uM_4h_05
• PA_50uM_4h_06
• PA_50uM_4h_07
• PA_50uM_8h_01
• PA_50uM_8h_04
• Starvation_1254_OA50_12h_02
• Starvation_1254_OA50_12h_04
• Starvation_1254_OA50_24h_02
• Starvation_1254_OA50_24h_03
• Starvation_1254_OA50_24h_04
• Starvation_1254_OA50_3d_02
• Starvation_1254_OA50_3d_04
• Starvation_1254_OA50_6h_02
• Starvation_1254_OA50_6h_03
• Starvation_1254_PA50_24h_03
• Starvation_1254_PA50_24h_04
• Starvation_1254_PA50_6h_03
• Starvation_OA50_24h_02
• Starvation_OA50_6h_01
• CDC1551.Ctrl.vs.H37Rv.rep.3
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
• CDC1551.ctrl.vs.ctrl.at.0.hr.rep.1
• Mtb.Erdman.strain.20.ppm.CO.rep.1
• Mtb.Erdman.strain.20.ppm.CO.rep.2
• Mtb.Erdman.strain.200.ppm.CO.rep.1
• Mtb.Erdman.strain.2000.ppm.CO.rep.2
• BCG.24hr.phagosomal.profile
• M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
• WT.TB.rep3
• MTB.in.Wild.type.macrophages.for.4hrs
• MTB.in.Wild.type.macrophages.for.24hrs
• MTB.in.Wild.type.macrophages...IFNg.for.4hrs
• MTB.in.Wild.type.macrophages...IFNg.for.24hrs
• MTB.in.Wild.type.macrophages...IFNg.for.48hrs
• Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
• Russell_Lab_Spotted_Oligos_1.2..14.day.resting.macrophage.infection.2hr..rep.2..Russell_Lab_Spotted_Oligos_1.2..
• Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
• Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
• Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
• Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
• SS_A1_RV.1
• SS_A1_RV.2
• SS_A1_RV.3
• WT_140mM_NaCl_Rep2
• WT_140mM_NaCl_Rep4
• wild.type..mc.2.6020...biological.rep2
• Mtm.0.2ug.mL.vs.ctrl.8h.1.y
• H37Rv.Ctrl.vs.10.ug.ml.garlic.extract.6hrs