Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0463
• Rv0578c
• Rv0742
• Rv1494
• Rv1495
• Rv1548c
• Rv1788
• Rv2126c
• Rv2157c
• Rv2356c
• Rv2371
• Rv2615c
• Rv2802c
• Rv2811
• Rv3019c
• Rv3346c
• Rv3657c
• Rv3658c

Bicluster Conditions

• Strain.CDC1551..replicate.2
• Strain.CDC1551..replicate.4
• Strain.1006...replicate.1
• Strain.1006...replicate.2
• Strain.1006...replicate.4
• Strain.1254...replicate.2
• Strain.1254...replicate.3
• Strain.1843..replicate.1
• Strain.1843...replicate.2
• Strain.1843...replicate.3
• Strain.1843..replicate.4
• Strain.3160..replicate.2
• Strain.9700665..replicate.1
• Strain.9800608..replicate.1
• Strain.9800608...replicate.3
• Strain.9800608..replicate.4
• Strain.9802501..replicate1
• Strain.9802501..replicate.2
• Strain.9802501..replicate.3
• Strain.9802501..replicate.4
• Strain.9802826..replicate.2
• Strain.9802826..replicate.3
• Strain.9802826..replicate.4
• Strain.M3061a..replicate.2
• Strain.M3061a..replicate.3
• Strain.M3061a..replicate.4
• H37Rv.Vs.M.bovis.rep1
• H37Rv.Vs.M.bovis.rep3
• H37Rv.Vs.M.bovis.rep4
• MTB.strain.1254.Ctrl.vs.high.aeration.rep1
• MTB.strain.1254.Ctrl.vs.high.aeration.rep2
• MTB.strain.1254.Ctrl.vs.high.aeration.rep3
• MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1
• MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2
• H37Rv.hypoxia.2hr.rep.1
• H37Rv.hypoxia.2hr.rep.2
• H37Rv.hypoxia.2hr.rep.4
• NRP.Day6..1
• NRP.Day6..2
• NRP.Day8..1
• NRP.Day10..1
• NRP.Day10..3
• NRP.Day12..3
• NRP.Day14..1
• NRP.Day14..3
• NRP.Day14..4
• NRP.Day14..5
• NRP.Day14..7
• NRP.Day14..8
• NRP.Day14..9
• PBS.Tween.7H9
• PBS.Tw.DMSOvs7H9..6h
• H37Rv.hypoxia.4hr.rep.1
• H37Rv.hypoxia.4hr.rep.2
• H37Rv.hypoxia.4hr.rep.4
• H37Rv.hypoxia.4hr.rep.6
• H37Rv.hypoxia.12hr.rep.1
• H37Rv.hypoxia.12hr.rep.2
• H37Rv.hypoxia.1.day.rep.6
• H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
• H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
• H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
• H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
• H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
• Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
• Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
• Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
• Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
• Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
• Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
• Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
• Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
• Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
• H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2
• H37Rv.wild.type.Vs.H37Rv.wild.type.rep.3
• H37Rv.wild.type.Vs.H37Rv.wild.type.rep.4
• Whole.Lung.Surfactant.2hrs.rep.3
• Whole.Lung.Surfactant.30min.rep.1
• Whole.Lung.Surfactant.30min.rep.3
• Whole.Lung.Surfactant.30min.rep.4
• Whole.Lung.Surfactant.30min.rep.5
• Extracted.Lung.Surfactant.2hrs.rep.1
• Extracted.Lung.Surfactant.30min.rep.1
• Extracted.Lung.Surfactant.30min.rep.3
• Purified.Surfactant.Lipids.2hrs.rep.2
• Purified.Human.SP.A.Coated.2hrs.rep1
• Purified.Human.SP.A.Coated.2hrs.rep2
• Purified.Human.SP.A.Uncoated.2hrs.rep1
• Purified.Human.SP.A.Uncoated.2hrs.rep3
• Purified.Human.SP.A.Uncoated.2hrs.rep4
• Glucose_5mM_10min_01
• Glycerol_1._30M_01
• CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.3
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.1
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.2
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.4
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.5
• H37Rv.reaeration.for.1hrs.rep.5
• H37Rv.reaeration.for.1hrs.rep.6
• H37Rv.reaeration.for.4hrs.rep.2
• H37Rv.reaeration.for.4hrs.rep.4
• H37Rv.reaeration.for.4hrs.rep.5
• H37Rv.reaeration.for.4hrs.rep.6
• H37Rv.reaeration.for.4hrs.rep.8
• H37Rv.reaeration.for.6hrs.rep.1
• H37Rv.reaeration.for.6hrs.rep.3
• H37Rv.reaeration.for.6hrs.rep.4
• H37Rv.reaeration.for.12hrs.rep.2
• H37Rv.reaeration.for.12hrs.rep.3
• H37Rv.reaeration.for.24hrs.rep.1
• H37Rv.reaeration.for.24hrs.rep.2
• H37Rv.reaeration.for.24hrs.rep.4
• H37Rv.reaeration.for.24hrs.rep.5
• H37Rv.reaeration.for.24hrs.rep.6
• SG2.A0_N02A01c3
• SG2.B0_N02A09c3
• SG2.D0_N02A01c5
• SG6.H0_N5A03cy.5
• SG7.AT0_N11A01cy.5
• SG.ISB.3.0A_N30A01cy.3
• SG.ISB.3.0B_N30A01cy.5
• SG6_B1_N7A11cy.5
• SG6_A1_N7A11cy.3
• SG2.A2_N02A03c3
• SG2.B2_N02A11c3
• SG8.A.Day.3_N37A09cy.3
• SG8.A.Day.5_N37A10cy.3
• SG8.B.Day.5_N37A08cy.5
• SG2.A5_N02A05c3
• SG6D.T7_N11A02cy.3
• SG7.T7D_N11A11cy.5
• SG8.B.Day.7_N37A09cy.5
• SG8.A.Day.7_N37A11cy.3
• SG.ISB.3.7C_N30A03cy.5
• SG12.C0_N32A05cy.5
• SG12.A0_N32A01cy.3
• SG12.C6_N32A09cy.5
• SG.ISB.3.8A_N30A04cy.5
• SG.ISB.3.8C_N30A05cy.5
• SG.ISB.3.8D_N30A06cy.3
• SG6.D11_N8A09cy.5
• SG6.B11_N5A11cy.5
• SG6.A11_N5A10cy.5
• SG12.C120_N32A12cy.5
• SG.ISB.3.12D_N30A08cy.3
• SG6.A14_N8A10cy.5
• SG6.B14_N8A11cy.5
• hip.mutant.KL2801..biological.rep2
• hip.mutant.KL2825..biological.rep2
• hip.mutant.KL2849..biological.rep2
• hip.mutant.HTS1090..biological.rep1
• hip.mutant.HTS1105..biological.rep1
• hip.mutant.HTS1105..biological.rep2
• hip.mutant.HT1130..biological.rep1
• hip.mutant.HT1134..biological.rep1
• hip.mutant.HT1134..biological.rep2
• hip.mutant.HT1137..biological.rep1
• hip.mutant.HT1170..biological.rep1
• X0.1mMGSNO.10ug.mLmdvsDMSO.6h
• X0.1mMGSNO.10ug.mLmdvsDMSO.6hA
• X0.1mMGSNO.20ug.mLCPZvsDMSO.6h
• X0.1mMGSNO.20ug.mLCPZvsDMSO.6hA
• X25ug.mLCPZ.0.1mMGSNO.DMSO..1
• X5ug.mL.CFZ.0.1mM.GSNO.DMSO..1
• X5ug.mL.CFZ.0.1mM.GSNO.DMSO..2
• X5ug.mLCFZ.0.1mMGSNOvsDMSO.A
• X0.1mMGSNO.5ug.mLKCNvsDMSO.6h
• X0.1mMGSNO.5ug.mLKCNvsDMSO.6h.A
• X10ug.mL.EconazolevsEtOH..6h
• X10ug.mL.EconazolevsEtOH..6hA
• X24ug.mL.Econazole.DMSO..6h..2
• X13ug.mL.clfzine.DMSO..6h..2
• X10ug.mLchlorpromazinevsctrl.6h
• X10ug.mLchlorpromazinevsctrl.6hA
• X10ug.mL.ChlorprovsEtOH
• X20ug.mL.chlorprmz.DMSO..6h..1
• X20ug.mL.chlorprmz.DMSO..6h..2
• X20ug.mL.CPZvsDMSO..6h
• X20ug.mL.CPZvsDMSO..6h.A
• X25ug.mL.CPZvsDMSO..6h.A
• X25ug.mL.CPZvsDMSO..6h.B
• X60ug.mL.ChlorprovsEtOH..6h
• X10ug.mL.ClotrimvsEtOH..6hA
• X10ug.mL.clotrimvsEtOH..6h
• X10uM.CCCP.DMSO..6h
• X50uM.CCCP.DMSO..6h..1
• X50uM.CCCP.DMSO..6h..2
• X0.5mM.DNP.DMSO..6h
• X1mM.DNP.DMSO..6h..1
• X1mM.DNP.DMSO..6h..2
• X2.5mM.Dinitrophenol.DMSO..6h
• X20uM.DCCD.DMSO..6h..1
• X20uM.DCCD.DMSO..6h..2
• X100uM.DCCD.DMSO..6h
• X2mM.DTTvsDMSO..6h
• X2mM.DTTvsDMSO..6h.A
• X5ug.mL.KCN.DMSO..6h..1
• X5ug.mL.KCN.DMSO..6h..2
• X20ug.mL.KCN.DMSO..6h
• X6ug.mL.MenadionevsDMSO..6h
• X10ug.mL.menadionevsDMSO..6h
• X10ug.mLmnd.Dubos.vsDMSO.6h
• X10ug.mLmdn.0.1mMGSNO.DMSO..2
• X50uM.NigericinvsDMSO..6h
• X50ug.mL.Thioridazine.DMSO..6h
• X0.5uMValinomycinvsDMSO.6h
• X1uM.ValinomycinvsDMSO..6h
• X10uM.ValinomycinvsDMSO..6h
• X2mM.ZnSO4.DMSO..6h
• H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep2
• H37Rv.Ctrl.vs.5.ug.ml.garlic.extract.6hrs
• X20ug.ml.KCN.vs.DMSO.6hrs.y
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.2
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.1
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.2
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.2
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.1