Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0010c
• Rv0051
• Rv0419
• Rv0655
• Rv0917
• Rv1121
• Rv1417
• Rv1493
• Rv1565c
• Rv2291
• Rv2693c
• Rv2751
• Rv2809
• Rv3221c
• Rv3339c
• Rv3518c
• Rv3540c
• Rv3551
• Rv3552

Bicluster Conditions

• H37Rv.0.05..SDS.exposure.for.1h.rep.1
• H37Rv.0.05..SDS.exposure.for.1h.rep.3
• MTB.strain.1254.Ctrl.vs.high.aeration.rep3
• H37Rv.vs..H37Rv.SDS.treated.rep.1
• H37Rv.vs..H37Rv.SDS.treated.rep.3
• H37Rv.vs..H37Rv.SDS.treated.rep.4
• H37Rv.vs..H37Rv.SDS.treated.rep.5
• H37Rv.vs..H37Rv.SDS.treated.rep.6
• High.iron.wt.vs.low.iron.wt.1b
• High.iron.wt.vs.low.iron.wt.2a
• High.iron.wt.vs.low.iron.wt.2b
• High.iron.wt.vs.low.iron.wt.3a
• High.iron.wt.vs.low.iron.wt.3b
• H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.1
• H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4
• H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.5
• H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.6
• Whole.Lung.Surfactant.2hrs.rep.2
• Whole.Lung.Surfactant.30min.rep.3
• Whole.Lung.Surfactant.30min.rep.4
• Whole.Lung.Surfactant.30min.rep.5
• Extracted.Lung.Surfactant.30min.rep.1
• Extracted.Lung.Surfactant.30min.rep.3
• Extracted.Lung.Surfactant.30min.rep.4
• Purified.Surfactant.Lipids.2hrs.rep.1
• Purified.Surfactant.Lipids.2hrs.rep.2
• Purified.Surfactant.Lipids.30min.rep.1
• Purified.Surfactant.Lipids.30min.rep.2
• Purified.Human.SP.A.Uncoated.2hrs.rep1
• Purified.Human.SP.A.Uncoated.2hrs.rep4
• X20ug.ml.KCN.vs.DMSO.6hrs.x
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
• MTB1254_SDS_90MIN_01
• SDS_3h_01
• SDS_60min_01
• Starvation_1254_OA50_24h_02
• Starvation_1254_OA50_3d_01
• Starvation_1254_OA50_5d_01
• Starvation_1254_OA50_5d_02
• Starvation_1254_OA50_5d_03
• Starvation_1254_OA50_6h_02
• Starvation_1254_OA50_6h_04
• Starvation_1254_PA50_24h_02
• Starvation_1254_PA50_24h_04
• Starvation_1254_PA50_6h_01
• Starvation_1254_PA50_6h_02
• Starvation_1254_PA50_6h_03
• Starvation_OA50_24h_01
• Starvation_OA50_24h_02
• Starvation_OA50_6h_01
• Starvation_OA50_6h_04
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
• H37Rv.reaeration.for.1hrs.rep.5
• H37Rv.reaeration.for.1hrs.rep.6
• H37Rv.reaeration.for.1hrs.rep.8
• H37Rv.reaeration.for.4hrs.rep.2
• H37Rv.reaeration.for.4hrs.rep.5
• H37Rv.reaeration.for.4hrs.rep.6
• H37Rv.reaeration.for.4hrs.rep.7
• H37Rv.reaeration.for.4hrs.rep.8
• H37Rv.reaeration.for.12hrs.rep.1
• H37Rv.reaeration.for.12hrs.rep.2
• H37Rv.reaeration.for.12hrs.rep.3
• H37Rv.reaeration.for.24hrs.rep.3
• H37Rv.reaeration.for.24hrs.rep.4
• H37Rv.reaeration.for.24hrs.rep.5
• H37Rv.reaeration.for.24hrs.rep.6
• MTB.in.Wild.type.macrophages.for.48hrs
• MTB.in.Wild.type.macrophages...IFNg.for.4hrs
• Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
• Russell_Lab_Spotted_Oligos_1.2..14.day.resting.macrophage.infection.2hr..rep.2..Russell_Lab_Spotted_Oligos_1.2..
• Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
• Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
• Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
• Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
• Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
• Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
• Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
• Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
• Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
• Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
• Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
• Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
• MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.3
• X0.2ug.mL..111891.DMSO..5.5h..3
• X2ug.mL..111891vsDMSO..6h
• X1ug.mL..111891.DMSO..12h..1
• X1ug.mL..111891.DMSO..12h..2
• X1ug.mL..111895vsDMSO..6hA
• X2ug.mL..111895vsDMSO..6h
• X2ug.mL..111895vsDMSO..6hB
• X0.5ug.mL..121940vsDMSO.6h
• X0.5ug.mL..121940vsDMSO.6hA
• X2ug.mL..121940vsDMSO..6h
• X2ug.mL..121940vsDMSO..6hA
• X1ug.mL..121940.DMSO..12h
• X0.1mMGSNO.10ug.mLmdvsDMSO.6h
• X0.1mMGSNO.20ug.mLCPZvsDMSO.6h
• X25ug.mLCPZ.0.1mMGSNO.DMSO..3
• X5ug.mL.CFZ.0.1mM.GSNO.DMSO..1
• X5ug.mLCFZ.0.1mMGSNOvsDMSO.A
• X10ug.mL.EconazolevsEtOH..6h
• X24ug.mL.Econazole.DMSO..6h..1
• X10ug.mLchlorpromazinevsctrl.6hA
• X10ug.mL.ChlorprovsEtOH
• X10ug.mL.ChlorprovsEtOH..6h
• X20ug.mL.CPZvsDMSO..6h
• X60ug.mL.ChlorprovsEtOH..6h
• X24ug.mL.cltrmazole.DMS..6h..3
• X10uM.CCCP.DMSO..6h
• X50uM.CCCPvsDMSO..6h
• X1mM.DNP.DMSO..6h..1
• X200uM.Dipyridylvsctrl..6h
• X200uM.Dipyridylvsctrl..6hA
• X250uM.DeferroxaminevsDMSO..6h
• X6ug.mL.MenadionevsDMSO..6h
• X10ug.mL.menadionevsDMSO..6h
• X50uM.NigericinvsDMSO..6h
• X50uM.NigericinvsDMSO..6h.A
• X9ug.mLAscidideminNpvsDMSO.6hA
• X10ug.mL.TRZ.DMSO..6h..1
• X10ug.mL.TRZ.DMSO..6h..2
• X25ug.mL.TRZ.DMSO..6h
• X50ug.mL.Thioridazine.DMSO..6h
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.1
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.2
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.1
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.2
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.2
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.2