Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0242c
• Rv0316
• Rv1162
• Rv1164
• Rv1167c
• Rv1210
• Rv1237
• Rv1287
• Rv1505c
• Rv1527c
• Rv1667c
• Rv1877
• Rv2398c
• Rv2693c
• Rv2755c
• Rv2957
• Rv3239c
• Rv3518c
• Rv3664c
• Rv3721c

Bicluster Conditions

• MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.1
• MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.2
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.1
• H37Rv.0.2..Oxygen..2h..1
• H37Rv.0.2..Oxygen..2h..2
• H37Rv.0.2..Oxygen..2h..6
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.3
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
• Starvation_1254_12h_01
• Starvation_1254_12h_02
• Starvation_1254_12h_03
• Starvation_1254_12h_04
• Starvation_1254_24h_01
• Starvation_1254_24h_02
• Starvation_1254_24h_03
• Starvation_1254_24h_04
• Starvation_1254_24h_05
• Starvation_1254_24h_06
• Starvation_1254_24h_07
• Starvation_1254_24h_08
• Starvation_1254_3d_01
• Starvation_1254_3d_02
• Starvation_1254_3d_03
• Starvation_1254_3d_04
• Starvation_1254_5d_01
• Starvation_1254_5d_02
• Starvation_1254_5d_03
• Starvation_1254_5d_04
• Starvation_1254_6h_01
• Starvation_1254_6h_02
• Starvation_1254_6h_03
• Starvation_1254_6h_04
• Starvation_1254_6h_05
• Starvation_1254_6h_06
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
• H37Rv.reaeration.for.1hrs.rep.4
• H37Rv.reaeration.for.1hrs.rep.6
• H37Rv.reaeration.for.4hrs.rep.1
• H37Rv.reaeration.for.4hrs.rep.3
• H37Rv.reaeration.for.4hrs.rep.4
• H37Rv.reaeration.for.4hrs.rep.5
• H37Rv.reaeration.for.6hrs.rep.2
• H37Rv.reaeration.for.6hrs.rep.5
• H37Rv.reaeration.for.12hrs.rep.1
• H37Rv.reaeration.for.12hrs.rep.4
• H37Rv.reaeration.for.24hrs.rep.1
• H37Rv.reaeration.for.24hrs.rep.4
• BCG.2hr.phagosomal.profile
• BCG.24hr.phagosomal.profile
• M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
• MTB.in.Wild.type.macrophages.for.4hrs
• MTB.in.Wild.type.macrophages.for.24hrs
• MTB.in.Wild.type.macrophages.for.48hrs
• MTB.in.Wild.type.macrophages...IFNg.for.4hrs
• Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
• Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
• Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
• Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
• Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
• Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
• Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
• Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
• Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
• WT_140mM_NaCl_Rep1
• WT_140mM_NaCl_Rep2
• WT_140mM_NaCl_Rep3
• WT_140mM_NaCl_Rep4
• MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.1
• X0.1mMGSNO.20ug.mLCPZvsDMSO.6h
• X0.1mMGSNO.20ug.mLCPZvsDMSO.6hA
• X25ug.mLCPZ.0.1mMGSNO.DMSO..1
• X25ug.mLCPZ.0.1mMGSNO.DMSO..2
• X25ug.mLCPZ.0.1mMGSNO.DMSO..3
• X25ug.mLCPZ.0.1mMGSNOvsDMSO.A
• X5ug.mL.CFZ.0.1mM.GSNO.DMSO..1
• X5ug.mL.CFZ.0.1mM.GSNO.DMSO..2
• X5ug.mLCFZ.0.1mMGSNOvsDMSO.A
• X13ug.mL.clfzine.DMSO..6h..1
• X10ug.mLchlorpromazinevsctrl.6h
• X20ug.mL.CPZvsDMSO..6h
• X20ug.mL.CPZvsDMSO..6h.A
• X25ug.mL.CPZvsDMSO..6h.A
• X60ug.mL.ChlorprovsEtOH..6h
• X10ug.mL.ClotrimvsEtOH..6hA
• X10ug.mL.clotrimvsEtOH..6h
• X10uM.CCCP.DMSO..6h
• X50uM.CCCPvsDMSO..6h
• X1mM.DNP.DMSO..6h..1
• X1mM.DNP.DMSO..6h..2
• X100uM.DCCD.DMSO..6h
• X2mM.DTTvsDMSO..6h.A
• X10ug.mLmdn.0.1mMGSNO.DMSO..2
• X10ug.mL.TRZ.DMSO..6h..1
• X1uM.ValinomycinvsDMSO..6h
• X1uM.ValinomycinvsDMSO..6h.A
• X1uM.ValinomycinvsDMSO..6h.B
• X10uM.ValinomycinvsDMSO..6h
• X0.5uMValinomycin.70mMKClvsDMSO.6h
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.2
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.2