ID: 552f4c13b744335b89d60777
# Conditions: 270
# Genes: 18
Residual: 0.4790864903287
# Conditions: 270
# Genes: 18
Residual: 0.4790864903287
Bicluster Motifs
Bicluster Genes
- Rv0447c
- Rv0805
- Rv1194c
- Rv2190c
- Rv2396
- Rv2430c
- Rv2432c
- Rv2785c
- Rv2837c
- Rv3376
- Rv3400
- Rv3404c
- Rv3680
- Rv3722c
- Rv3723
- Rv3748
- Rv3821
- Rv3920c
Bicluster Conditions
- H37Rv.0.05..SDS.exposure.for.1h.rep.2
- H37Rv.0.05..SDS.exposure.for.1h.rep.3
- H37Rv.0.05..SDS.exposure.for.1h.rep.4
- H37Rv.0.05..SDS.exposure.for.1h.rep.5
- MTB.strain.1254.Ctrl.vs.high.aeration.rep1
- MTB.strain.1254.Ctrl.vs.high.aeration.rep2
- MTB.strain.1254.Ctrl.vs.high.aeration.rep3
- MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.1
- MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.2
- MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.3
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.1
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.2
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.3
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.4
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.5
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.6
- H37Rv.0.2..Oxygen..2h..1
- H37Rv.0.2..Oxygen..2h..2
- H37Rv.0.2..Oxygen..2h..3
- H37Rv.0.2..Oxygen..2h..4
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.3
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.4
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.5
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.6
- pH4.8vspH6.8..2h.
- pH4.8vspH6.8..2h.A
- pH4.8vspH6.8..2h.B
- pH4.8vspH6.8..4h.
- pH4.8vspH6.8..4h.A
- pH4.8vspH6.8..4h.C
- pH4.8vspH6.8..5.5h.
- pH4.8vspH6.8..7h.
- pH4.8vspH6.8..11h.
- pH5.2vspH6.8..2h.
- pH5.2vspH6.8..10.5h.
- pH5.6vspH6.8..2h.
- pH5.6vspH6.8..4h.B
- pH5.6vspH6.8..11h.
- pH5.6vspH6.8..16h.
- X0.1ug.mL.Mtmvsctrl..0.75h..x
- X0.1ug.mL.Mtmvsctrl..1.5h..x
- X0.2ug.mL.Mtmvsctrl..0.75h..x
- X0.2ug.mL.Mtmvsctrl..1.5h..x
- X0.2ug.mL.Mtmvsctrl..2h.C.x
- X0.2ug.mL.Mtmvsctrl..4h..x
- X0.2ug.mL.Mtmvsctrl..4h.A.x
- X0.2ug.mL.Mtmvsctrl..4h.B.x
- X0.2ug.mL.Mtm.ctrl..4h...2.x
- X0.2ug.mL.Mtmvsctrl..6h..x
- PBS.Tw.DMSOvs7H9..6h
- Whole.Lung.Surfactant.2hrs.rep.1
- Whole.Lung.Surfactant.2hrs.rep.2
- Whole.Lung.Surfactant.2hrs.rep.3
- Whole.Lung.Surfactant.30min.rep.3
- Whole.Lung.Surfactant.30min.rep.4
- Whole.Lung.Surfactant.30min.rep.5
- Extracted.Lung.Surfactant.2hrs.rep.1
- Extracted.Lung.Surfactant.2hrs.rep.2
- Extracted.Lung.Surfactant.30min.rep.1
- Extracted.Lung.Surfactant.30min.rep.2
- Extracted.Lung.Surfactant.30min.rep.4
- Purified.Surfactant.Lipids.2hrs.rep.1
- Purified.Surfactant.Lipids.2hrs.rep.2
- Purified.Surfactant.Lipids.30min.rep.2
- Purified.Human.SP.A.Coated.2hrs.rep2
- Purified.Human.SP.A.Uncoated.2hrs.rep1
- Purified.Human.SP.A.Uncoated.2hrs.rep3
- Purified.Human.SP.A.Uncoated.2hrs.rep4
- X20ug.ml.KCN.vs.DMSO.6hrs.x
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
- SDS_60min_01
- Starvation_1254_12h_01
- Starvation_1254_12h_02
- Starvation_1254_12h_03
- Starvation_1254_12h_04
- Starvation_1254_24h_01
- Starvation_1254_24h_02
- Starvation_1254_24h_03
- Starvation_1254_24h_04
- Starvation_1254_24h_05
- Starvation_1254_24h_06
- Starvation_1254_24h_07
- Starvation_1254_24h_08
- Starvation_1254_3d_01
- Starvation_1254_3d_02
- Starvation_1254_3d_03
- Starvation_1254_3d_04
- Starvation_1254_5d_01
- Starvation_1254_5d_02
- Starvation_1254_5d_03
- Starvation_1254_5d_04
- Starvation_1254_6h_01
- Starvation_1254_6h_02
- Starvation_1254_6h_03
- Starvation_1254_6h_04
- Starvation_1254_6h_05
- Starvation_1254_6h_06
- Starvation_1254_6h_07
- Starvation_1254_6h_08
- H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.1
- H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.2
- H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3
- H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1
- H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.3
- Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
- H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
- H37Rv.reaeration.for.1hrs.rep.1
- H37Rv.reaeration.for.1hrs.rep.2
- H37Rv.reaeration.for.1hrs.rep.3
- H37Rv.reaeration.for.1hrs.rep.4
- H37Rv.reaeration.for.1hrs.rep.8
- H37Rv.reaeration.for.4hrs.rep.2
- H37Rv.reaeration.for.4hrs.rep.3
- H37Rv.reaeration.for.4hrs.rep.4
- H37Rv.reaeration.for.4hrs.rep.7
- H37Rv.reaeration.for.6hrs.rep.3
- H37Rv.reaeration.for.6hrs.rep.4
- H37Rv.reaeration.for.6hrs.rep.5
- H37Rv.reaeration.for.12hrs.rep.4
- H37Rv.reaeration.for.24hrs.rep.2
- H37Rv.reaeration.for.24hrs.rep.5
- Mtb.response.to.pH.5.5..6.replicates.
- Mtb.response.to.pH.6.5..6.replicates.
- BCG.2hr.phagosomal.profile
- BCG.24hr.phagosomal.profile
- M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
- M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
- MTB.in.Wild.type.macrophages.for.24hrs
- MTB.in.Wild.type.macrophages...IFNg.for.24hrs
- MTB.in.Wild.type.macrophages...IFNg.for.48hrs
- Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
- Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
- Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
- MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.1
- MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.2
- MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.3
- X1ug.mL..109vsDMSO..6h
- X10ug.mL..109vsDMSO..6hA
- X.109..1ug.mL..vs.DMSO..12h..replicate.2..GEO.acc.GSM28052.
- X1ug.mL..241vsDMSO..6hA
- X0.5ug.mL..111891vsDMSO.6h
- X0.5ug.mL..111891vsDMSO.6hA
- X1ug.mL..111895vsDMSO..6h
- X1ug.mL..111895vsDMSO..6hA
- X1ug.mL..121940.DMSO..12h
- X1ug.mL..124196vsDMSO..6hA
- X25ug.mLCPZ.0.1mMGSNO.DMSO..2
- X25ug.mLCPZ.0.1mMGSNO.DMSO..3
- X5ug.mL.CFZ.0.1mM.GSNO.DMSO..2
- DIPED.5ug.mL.vs.DMSO.12h.1
- DIPED.5ug.mL.vs.DMSO.12h.2
- X0.2ug.mL.Mtmvsctrl..2h.C.y
- X0.2ug.mL.Mtmvsctrl..4h.A.y
- X0.2ug.mL.Mtmvsctrl..4h.B.y
- X0.2ug.mL.Mtm.ctrl..4h...2.y
- X0.15mg.mL.TricvsEtOH..6h
- X50ug.mL.Triclosan.DMSO..6h
- X50ug.mL.TriclosanvsEtOH..6h
- X50ug.mL.TriclosanvsEtOH..6hA
- X100ug.mL.TriclosanvsEtOH..6h
- X100ug.mL.TriclosanvsEtOH..6hA
- X10ug.mL.EconazolevsEtOH..6h
- X24ug.mL.Econazole.DMSO..6h..1
- EMB.10ug.mL.vs.DMSO.12h.1
- X20ug.mL.ethambutol.DMSO
- X13ug.mL.clfzine.DMSO..6h..1
- X0.32ug.mL.CervsEtOH..6h
- X0.32ug.mL.CervsEtOH..6hA
- X0.5ug.mL.CervsEtOH..6h
- X0.5ug.mL.CervsEtOH..6hA
- X0.5ug.mL.CeruleninvsDMSO..6hC
- X20ug.mL.Cephalexin.Ctrl..6h..1
- X100ug.mL.Cephalexin.Ctrl..6h
- X10ug.mL.ChlorprovsEtOH
- X10ug.mL.ChlorprovsEtOH..6h
- X20ug.mL.chlorprmz.DMSO..6h..1
- X25ug.mL.CPZvsDMSO..6h.A
- X25ug.mL.CPZvsDMSO..6h.B
- X24ug.mL.cltrmazole.DMS..6h..1
- X24ug.mL.cltrmazole.DMS..6h..2
- X10uM.CCCP.DMSO..6h
- X100uM.Dipyridylvsctrl..6h
- X20ug.mL.KCN.DMSO..6h
- X6ug.mL.MenadionevsDMSO..6h
- X10ug.mLmdn.0.1mMGSNO.DMSO..2
- X50uM.NigericinvsDMSO..6h
- X10ug.mL.Nvb.DMSO..6h..1
- X9ug.mLAscidideminNpvsDMSO.6hA
- X10ug.mL.OfloxvsDMSO..6h
- X10ug.mL.OfloxvsDMSO..6hA
- X130ug.mL.TLMvsDMSO..6h
- X130ug.mL.TLMvsDMSO..6hA
- X0.13mg.mL.TLMvsDMSO..6h
- X0.13mg.mL.TLMvsDMSO..6hA
- X10ug.mL.TRZ.DMSO..6h..1
- X10ug.mL.TRZ.DMSO..6h..2
- X0.5uMValinomycinvsDMSO.6h
- X1uM.ValinomycinvsDMSO..6h.A
- X10uM.ValinomycinvsDMSO..6h
- X0.5uMValinomycin.70mMKClvsDMSO.6h
- X2mM.ZnSO4.DMSO..6h
- X20ug.ml.KCN.vs.DMSO.6hrs.y
- X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.x
- X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2
- X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.1
- X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.2
- X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.2
- X130ug.ml.TLM.vs.DMSO.6hrs.rep.1
- X130ug.ml.TLM.vs.DMSO.6hrs.rep.2
- X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.1
- X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.2
- X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.3
- X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.4
- X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.1
- X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.2
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1
- CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.1
- CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.2
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.1
- CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.1
- CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.2
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.1
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.2
- CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.1
- CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.2
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.1
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.2
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.3
- H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
- H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
- H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
- H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
- H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
- H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.2
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.1
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.1
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.2
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.1
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.2
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.1
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.2
- H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.1
- H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.2