Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0323c
• Rv0388c
• Rv0794c
• Rv0835
• Rv1647
• Rv1664
• Rv1681
• Rv1847
• Rv1864c
• Rv2041c
• Rv2285
• Rv2755c
• Rv2801c
• Rv2835c
• Rv2869c
• Rv3542c
• Rv3571
• Rv3695
• Rv3730c
• Rv3848
• Rv3906c
• Rv3912

Bicluster Conditions

• High.iron.wt.vs.low.iron.wt.1a
• High.iron.wt.vs.low.iron.wt.1b
• High.iron.wt.vs.low.iron.wt.2b
• High.iron.wt.vs.low.iron.wt.3a
• X0.1ug.mL.Mtmvsctrl..0.33h..x
• X0.1ug.mL.Mtmvsctrl..1.5h..x
• X0.2ug.mL.Mtmvsctrl..0.75h..x
• X0.2ug.mL.Mtmvsctrl..2h..x
• X0.2ug.mL.Mtmvsctrl..2h.A.x
• X0.2ug.mL.Mtmvsctrl..2h.B.x
• X0.2ug.mL.Mtmvsctrl..2h.C.x
• X0.2ug.mL.Mtmvsctrl..4h..x
• X0.2ug.mL.Mtmvsctrl..4h.B.x
• X0.2ug.mL.Mtm.ctrl..4h...1.x
• X0.2ug.mL.Mtm.ctrl..4h...2.x
• X0.2ug.mL.Mtmvsctrl..6h..x
• X20ug.ml.KCN.vs.DMSO.6hrs.x
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
• aceatate.induction.2
• aceatate.induction.3
• Acetate.3mM.10m.01
• Acetate.3mM.10m.03
• Acetate.3mM.10m.05
• Acetate.3mM.10m.07
• Acetate.3mM.2h.02
• Acetate.3mM.2h.05
• Acetate.3mM.2h.06
• Acetate.3mM.30m.02
• Acetate.3mM.30m.05
• Acetate.3mM.30m.06
• Acetate.3mM.30m.07
• Acetate.3mM.30m.08
• Acetate.3mM.60m.01
• Acetate.3mM.60m.04
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
• MTB.in.Wild.type.macrophages.for.4hrs
• MTB.in.Wild.type.macrophages.for.24hrs
• MTB.in.Wild.type.macrophages...IFNg.for.24hrs
• MTB.in.Wild.type.macrophages...IFNg.for.48hrs
• Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
• Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
• Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
• Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
• Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
• Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
• Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
• Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
• Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
• Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
• MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.3
• X30ug.mLProcept6776vsDMSO.6h
• X30ug.mLProcept6776vsDMSO.6hA
• X20ug.mL.Prcp.6778.DMSO..6h..1
• X20ug.mL.Prcp.6778.DMSO..6h..2
• X20ug.mLProcept6778vsDMSO.6hA
• X20ug.mLProcept6778vsDMSO.6hB
• X10ug.mL.PA.1vsDMSO..6h
• X10ug.mL.PA.21vsDMSO..6h
• X0.2ug.mL.PA824.DMSO..6h..1
• X0.4ug.mL.PA824.DMSO..6h..1
• X40ug.mL.5CL.pH5.6..2h..1
• X40ug.mL.5CL.pH5.6..4h..2
• X40ug.mL.5CL.pH5.6..4h..3
• X80ug.mL.5CL.pH5.6..2h.
• X0.12mg.mL.BZA.pH5.6..4h..1
• X0.12mg.mL.BZAvspH5.6..7h.
• X0.12mg.mL.BZAvspH5.6..11h.
• X0.12mg.mL.Nam.pH5.6..2h..1
• X0.12mg.mL.NamvspH5.6..5.5h.
• X0.12mg.mL.NamvspH5.6..7h.
• X0.12mg.mL.PZA.pH5.6..2h.
• X0.12mg.mL.PZA.pH5.6..2.5h.
• X0.12mg.mL.PZA.pH5.6..4h..1
• X0.12mg.mL.PZA.pH5.6..4h..2
• X0.12mg.mL.PZAvspH5.6..5.5h.
• X1.2mg.mL.PZA.pH5.6..2h..
• X1.2mg.mL.PZAvspH5.6..6h.A
• X1.2mg.mL.PZAvspH5.6..16h.
• X0.1mMGSNO.20ug.mLCPZvsDMSO.6h
• X0.1mMGSNO.5ug.mLKCNvsDMSO.6h.A
• X0.1ug.mL.Mtmvsctrl..1.5h..y
• X0.2ug.mL.Mtmvsctrl..0.75h..y
• X0.2ug.mL.Mtmvsctrl..2h..y
• X0.2ug.mL.Mtmvsctrl..2h.A.y
• X0.2ug.mL.Mtmvsctrl..2h.B.y
• X0.2ug.mL.Mtmvsctrl..2h.C.y
• X0.2ug.mL.Mtmvsctrl..4h.B.y
• X0.2ug.mL.Mtm.ctrl..4h...1.y
• X0.2ug.mL.Mtm.ctrl..4h...2.y
• X24ug.mL.Econazole.DMSO..6h..1
• X25ug.mL.AntimycinvsDMSO..6h
• X13ug.mL.clfzine.DMSO..6h..2
• X10ug.mLchlorpromazinevsctrl.6h
• X10ug.mLchlorpromazinevsctrl.6hA
• X20ug.mL.CPZvsDMSO..6h.A
• X60ug.mL.ChlorprovsEtOH..6h
• X10uM.CCCP.DMSO..6h
• X50uM.CCCP.DMSO..6h..1
• X0.5mM.DNP.DMSO..6h
• X1mM.DNP.DMSO..6h..1
• X1mM.DNP.DMSO..6h..2
• X2.5mM.Dinitrophenol.DMSO..6h
• X20uM.DCCD.DMSO..6h..1
• X2mM.DTTvsDMSO..6h.A
• X5ug.mL.KCN.DMSO..6h..1
• X10ug.mL.LevovsEtOH..6h
• X10ug.mL.LevovsEtOH..6hA
• X10ug.mL.menadionevsDMSO..6h
• X10ug.mLmnd.Dubos.vsDMSO.6h
• X50uM.NigericinvsDMSO..6h
• X10ug.mL.OfloxvsDMSO..6h
• X10ug.mL.OfloxvsDMSO..6hA
• X10ug.mL.TRZ.DMSO..6h..2
• X50ug.mL.Thioridazine.DMSO..6h
• X0.5uMValinomycinvsDMSO.6h
• X2mM.ZnSO4.DMSO..6h
• X20ug.ml.KCN.vs.DMSO.6hrs.y
• X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1
• X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
• X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.1
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.2
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.1
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.2
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.2
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.1
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.1
• MTB.at.T0..biological.rep1
• MTB.at.T0..biological.rep2
• MTB.at.T0..biological.rep3
• MTB.at.T0..biological.rep4
• MTB.at.T30..biological.rep1
• MTB.at.T30..biological.rep2
• MTB.at.T30..biological.rep3
• MTB.at.T60..biological.rep1
• MTB.at.T60..biological.rep2
• MTB.at.T180..biological.rep1
• MTB.at.T180..biological.rep2
• MTB.at.T180..biological.rep3
• MTB.at.T180..biological.rep4
• MTB.at.T360..biological.rep2
• MTB.at.T360..biological.rep3
• MTB.at.T360..biological.rep4