Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0048c
• Rv0246
• Rv0258c
• Rv0305c
• Rv0329c
• Rv0737
• Rv1056
• Rv1414
• Rv1455
• Rv1470
• Rv1482c
• Rv1554
• Rv1651c
• Rv1801
• Rv2107
• Rv2638
• Rv2668
• Rv2884
• Rv3572

Bicluster Conditions

• H37Rv.0.05..SDS.exposure.for.1h.rep.3
• H37Rv.0.05..SDS.exposure.for.1h.rep.5
• MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.3
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.1
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.2
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.3
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.4
• H37Rv.vs..H37Rv.SDS.treated.rep.1
• H37Rv.vs..H37Rv.SDS.treated.rep.2
• H37Rv.vs..H37Rv.SDS.treated.rep.5
• H37Rv.vs..H37Rv.SDS.treated.rep.6
• H37Rv.0.2..Oxygen..2h..1
• H37Rv.0.2..Oxygen..2h..2
• H37Rv.0.2..Oxygen..2h..5
• H37Rv.0.2..Oxygen..2h..6
• pH4.8vspH6.8..2h.
• pH4.8vspH6.8..2h.A
• pH4.8vspH6.8..4h.
• pH4.8vspH6.8..4h.A
• pH4.8vspH6.8..4h.B
• pH4.8vspH6.8..4h.C
• pH4.8vspH6.8..5h.
• pH4.8vspH6.8..5.5h.
• pH4.8vspH6.8..6h.
• pH4.8vspH6.8..7h.
• pH4.8vspH6.8..11h.
• pH5.2vspH6.8..2h.
• pH5.2vspH6.8..5h.
• pH5.2vspH6.8..5.5h.
• pH5.2vspH6.8..10.5h.
• pH5.2vspH6.8..16h.
• pH5.6vspH6.8..2h.
• pH5.6vspH6.8..2h.A
• pH5.6vspH6.8..4h.
• pH5.6vspH6.8..5h.
• pH5.6vspH6.8..7h.
• X0.2ug.mL.Mtmvsctrl..2h.A.x
• X0.2ug.mL.Mtmvsctrl..2h.C.x
• X0.2ug.mL.Mtmvsctrl..4h..x
• X0.2ug.mL.Mtmvsctrl..4h.B.x
• X0.2ug.mL.Mtmvsctrl..6h..x
• X4mM.H2O2vsctrl..2h.
• X4mM.H2O2.ctrl..2h...2
• H2O2.4mM.vs.ctrl.8h.1
• H2O2.4mM.vs.ctrl.12h.1
• PBS.Tw.DMSOvs7H9..6h
• X20mJ.UVvsctrl..6h.
• UV.20J.vs.ctrl.8h.1
• X25J.UV.ctrl..2h.
• UV.40J.vs.8h.2
• X40mJ.UV.ctrl..6h.
• UV.40J.vs.ctrl.8h.1
• UV.40J.vs.ctrl.12h.1
• X60J.UV.ctrl..2h.
• X60J.UVvsctrl..6h.
• H37Rv.diamide.1h.rep.3
• H37Rv.diamide.1h.rep.4
• H37Rv.diamide.1h.rep.6
• H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.1
• H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.3
• H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4
• H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.5
• H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.6
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.1
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6
• CHP_25uM_24h_01
• Glycerol_1.
• Glycerol_1._10M_01
• MTB1254_SDS_90MIN_02
• MTB1254_SDS_90MIN_04
• SDS_3h_01
• SDS_60min_01
• Mtb.Erdman.strain.20.ppm.CO.rep.1
• Mtb.Erdman.strain.20.ppm.CO.rep.2
• Mtb.response.to.pH.5.5..6.replicates.
• Mtb.response.to.pH.6.5..6.replicates.
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.2
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.3
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.6
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.1
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.2
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.3
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.4
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.6
• WT_140mM_NaCl_Rep3
• WT_140mM_NaCl_Rep4
• A00470_Q1_t30_diamide
• A00470_Q2_t60_diamide
• A00470_Q3_t90_diamide
• X10ug.mL..59.DMSO..6h
• X10ug.mL..59vsDMSO..6h
• X1ug.mL..109vsDMSO..6h
• X1ug.mL..109vsDMSO..6hA
• X10ug.mL..109.DMSO..6h
• X10ug.mL..109vsDMSO..6hA
• X.109..1ug.mL..vs.DMSO..12h..replicate.1..GEO.ac.GSM28051.
• X1ug.mL..241vsDMSO..6hA
• X10ug.mL..241.DMSO..6h
• X10ug.mL..241vsDMSO..6h
• X.241..1ug.mL..DMSO..12h..1
• X.241..10ug.mL..DMSO..12h..1
• X.241..10ug.mL..DMSO..12h..2
• DIPED.5ug.mL.vs.DMSO.12h.1
• DIPED.5ug.mL.vs.DMSO.12h.2
• DIPED.10ug.mL.vs.DMSO.12h.1
• DIPED.50ug.mL.vs.DMSO.12h.2
• X0.2ug.mL.Mtmvsctrl..2h..y
• X0.2ug.mL.Mtmvsctrl..2h.A.y
• X0.2ug.mL.Mtmvsctrl..2h.B.y
• X0.2ug.mL.Mtmvsctrl..2h.C.y
• X0.2ug.mL.Mtmvsctrl..4h..y
• X0.2ug.mL.Mtmvsctrl..4h.B.y
• X0.1mg.mL.TriclosanvsEtOH..6hA
• X0.1mg.mLTriclosanvsEtOH.6hB
• X10ug.mL.TriclosanvsDMSO..6h
• X10ug.mL.TriclosanvsDMSO..6hA
• X50ug.mL.TriclosanvsEtOH..6hA
• EMB.10ug.mL.vs.DMSO.12h.2
• EMB.10ug.mL.vs.DMSO.12h.4
• X20ug.mL.ethambutol.DMSO
• X0.32ug.mL.CervsEtOH..6h
• X0.32ug.mL.CervsEtOH..6hA
• X0.5ug.mL.CervsEtOH..6h
• X0.5ug.mL.CervsEtOH..6hA
• X0.5ug.mL.CeruleninvsDMSO..6hB
• X20ug.mL.Cephalexin.Ctrl..6h..2
• X100ug.mL.Ceph.DMSO..6h
• X100ug.mLCephalexinvsEtOH.6h
• X12ug.mLEthionamidevsEtOH.6h
• X12ug.mLEthionamidevsEtOH.6hA
• X0.2ug.mL.INH.EtOH..6h
• X10ug.mL.LevovsEtOH..6hA
• X5ug.mL.OfloxvsEtOH..6hA
• X10ug.mL.OfloxvsDMSO..6h
• X10ug.mL.OfloxvsDMSO..6hA
• X0.13mg.mL.TLMvsDMSO..6h
• X0.13mg.mL.TLMvsDMSO..6hA
• X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.x
• X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2
• X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1
• X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.1
• X130ug.ml.TLM.vs.DMSO.6hrs.rep.1
• X130ug.ml.TLM.vs.DMSO.6hrs.rep.2
• X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.2
• X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.1
• X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.2
• X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.3
• X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.4
• X10ug.ml.Ethambutol.vs.DMSO.12hrs.3
• H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
• H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.2
• H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
• H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
• H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
• H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.1
• H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.1
• H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.2
• H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.2
• H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.2
• H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.1
• H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.2
• H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.2