Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0060
• Rv0184
• Rv0185
• Rv0605
• Rv0606
• Rv0829
• Rv0922
• Rv1121
• Rv1633
• Rv2024c
• Rv2172c
• Rv2720
• Rv2735c
• Rv2736c
• Rv2737c
• Rv2789c
• Rv2790c
• Rv2791c
• Rv2792c
• Rv2979c
• Rv3074
• Rv3296
• Rv3711c
• Rv3777
• Rv3827c

Bicluster Conditions

• MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1
• MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2
• MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.3
• H37Rv.hypoxia.2hr.rep.1
• H37Rv.hypoxia.2hr.rep.2
• H37Rv.hypoxia.2hr.rep.3
• H37Rv.hypoxia.2hr.rep.4
• H37Rv.hypoxia.2hr.rep.5
• H37Rv.hypoxia.2hr.rep.6
• NRP.Day8..1
• NRP.Day10..1
• NRP.Day12..1
• NRP.Day12..2
• NRP.Day14..3
• NRP.Day14..5
• NRP.Day14..8
• NRP.Day30..1
• Mtm.0.2ug.mL.vs.ctrl.8h.1.x
• Mtm.0.2ug.mL.vs.ctrl.12h.1.x
• X4mM.H2O2vsctrl..2h.
• X4mM.H2O2.ctrl..2h...1
• X4mM.H2O2.ctrl..2h...2
• X4mM.H2O2.ctrl..4h...1
• X4mM.H2O2.ctrl..4h...2
• UV.20J.vs.ctrl.8h.1
• X25J.UV.ctrl..2h.
• X25J.UVvs.ctrl..6h.
• X40mJ.UV.ctrl..6h.
• UV.40J.vs.ctrl.8h.1
• X60J.UV.ctrl..2h.
• X60J.UVvsctrl..6h.
• UV.60J.vs.ctrl.6h.1
• H37Rv.hypoxia.4hr.rep.1
• H37Rv.hypoxia.4hr.rep.2
• H37Rv.hypoxia.4hr.rep.3
• H37Rv.hypoxia.4hr.rep.5
• H37Rv.hypoxia.4hr.rep.6
• H37Rv.hypoxia.4hr.rep.7
• H37Rv.hypoxia.8hr.rep.3
• H37Rv.hypoxia.12hr.rep.3
• H37Rv.hypoxia.1.day.rep.3
• H37Rv.hypoxia.1.day.rep.4
• H37Rv.hypoxia.1.day.rep.5
• H37Rv.hypoxia.1.day.rep.6
• H37Rv.hypoxia.1.day.rep.7
• H37Rv.hypoxia.1.day.rep.10
• H37Rv.hypoxia.4.day.rep.1
• H37Rv.hypoxia.4.day.rep.2
• H37Rv.hypoxia.4.day.rep.3
• H37Rv.hypoxia.4.day.rep.7
• H37Rv.hypoxia.7.day.rep.1
• H37Rv.hypoxia.7.day.rep.2
• H37Rv.hypoxia.7.day.rep.3
• H37Rv.hypoxia.7.day.rep.4
• H37Rv.hypoxia.7.day.rep.5
• H37Rv.hypoxia.7.day.rep.6
• H37Rv.diamide.1h.rep.1
• H37Rv.diamide.1h.rep.2
• H37Rv.diamide.1h.rep.4
• H37Rv.diamide.1h.rep.5
• H37Rv.diamide.1h.rep.6
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
• BCG.24hr.phagosomal.profile
• MTB.in.Wild.type.macrophages.for.4hrs
• MTB.in.Wild.type.macrophages.for.24hrs
• MTB.in.Wild.type.macrophages.for.48hrs
• MTB.in.Wild.type.macrophages...IFNg.for.4hrs
• MTB.in.Wild.type.macrophages...IFNg.for.24hrs
• MTB.in.Wild.type.macrophages...IFNg.for.48hrs
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.6
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.3
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.4
• Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
• Russell_Lab_Spotted_Oligos_1.2..14.day.resting.macrophage.infection.2hr..rep.2..Russell_Lab_Spotted_Oligos_1.2..
• Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
• Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
• Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
• Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
• Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
• Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
• Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
• SG2.A0_N02A01c3
• SG2.B0_N02A09c3
• SG2.D0_N02A01c5
• SG6.G0_N5A02cy.5
• SG6_B0_N7A10cy.5
• SG7.AT0_N11A01cy.5
• SG8.C.Day.1_N37A11cy.5
• SG8.C.Day.1_N27A09cy.3
• SG8.D.Day.1_N27A12cy.3
• SG8.B.Day.1_N37A05cy.5
• SG7.DT1_N11A08cy.5
• SG7.CT1_N11A07cy.5
• SG2.D1_N02A02c5
• SG2.B1_N02A10c3
• SG2.A1_N02A02c3
• SG2.B2_N02A11c3
• SG2.A3_N02A04c3
• SG2.A5_N02A05c3
• SG2.B5_N02A09c5
• SG2.D7_N02A06c5
• SG2.B7_N02A10c5
• SG6C.T7_N11A01cy.3
• SG7.T7B_N11A09cy.5
• SG8.B.Day.7_N37A09cy.5
• SG8.A.Day.7_N37A11cy.3
• SG.ISB.3.7A_N30A02cy.5
• SG.ISB.3.7B_N30A03cy.3
• SG.ISB.3.7C_N30A03cy.5
• SG.ISB.3.7D_N30A04cy.3
• SG12.B6_N32A01cy.5
• SG12.C6_N32A09cy.5
• SG12.B8_N32A02cy.5
• SG2.B8_N02A11c5
• SG6.D8_N5A09cy.5
• SG7.T8C_N11A07cy.3
• SG.ISB.3.8C_N30A05cy.5
• SG6.D11_N8A09cy.5
• SG6.C11_N5A12cy.5
• SG.ISB.3.12B_N30A07cy.3
• SG6.A14_N8A10cy.5
• A00470_Q1_t30_diamide
• A00470_Q2_t60_diamide
• A00470_Q3_t90_diamide
• A00437_Q1_t30_diamide
• A00437_Q2_t60_diamide
• A00436_Q1_t30_diamide
• A00436_Q2_t60_diamide
• A00436_Q3_t90_diamide