Bicluster

ID: 552f13cfb744335b89d49e49
# Conditions: 285
# Genes: 19
Residual: 0.48790996397661

Bicluster Motifs

Bicluster Genes

  • Rv0115
  • Rv0334
  • Rv0800
  • Rv1030
  • Rv1118c
  • Rv1138c
  • Rv1236
  • Rv1302
  • Rv1362c
  • Rv1662
  • Rv2040c
  • Rv2174
  • Rv2403c
  • Rv2434c
  • Rv2689c
  • Rv2796c
  • Rv3015c
  • Rv3664c
  • Rv3888c

Bicluster Conditions

  • MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1
  • H37Rv.hypoxia.2hr.rep.1
  • H37Rv.hypoxia.2hr.rep.2
  • H37Rv.hypoxia.2hr.rep.3
  • H37Rv.hypoxia.2hr.rep.4
  • H37Rv.hypoxia.2hr.rep.5
  • H37Rv.hypoxia.2hr.rep.6
  • NRP.Day6..1
  • NRP.Day6..3
  • NRP.Day10..2
  • NRP.Day14..3
  • NRP.Day14..8
  • NRP.Day14..9
  • NRP.Day20..1
  • pH4.8vspH6.8..2h.B
  • pH4.8vspH6.8..4h.
  • pH4.8vspH6.8..4h.A
  • pH4.8vspH6.8..4h.C
  • pH4.8vspH6.8..6h.
  • pH5.2vspH6.8..2h.
  • pH5.2vspH6.8..5.5h.
  • pH5.2vspH6.8..11h.
  • pH5.6vspH6.8..2h.A
  • pH5.6vspH6.8..4h.
  • pH5.6vspH6.8..7h.
  • pH5.6vspH6.8..11h.
  • X0.1ug.mL.Mtmvsctrl..0.33h..x
  • X0.2ug.mL.Mtmvsctrl..2h.C.x
  • X0.2ug.mL.Mtmvsctrl..4h..x
  • X0.2ug.mL.Mtmvsctrl..4h.B.x
  • X0.2ug.mL.Mtm.ctrl..4h...1.x
  • X0.2ug.mL.Mtmvsctrl..6h..x
  • Mtm.0.2ug.mL.vs.ctrl.8h.2.x
  • Mtm.0.2ug.mL.vs.ctrl.12h.1.x
  • H37Rv.hypoxia.4hr.rep.1
  • H37Rv.hypoxia.4hr.rep.2
  • H37Rv.hypoxia.4hr.rep.3
  • H37Rv.hypoxia.4hr.rep.4
  • H37Rv.hypoxia.4hr.rep.6
  • H37Rv.hypoxia.4hr.rep.7
  • H37Rv.hypoxia.8hr.rep.1
  • H37Rv.hypoxia.8hr.rep.2
  • H37Rv.hypoxia.8hr.rep.3
  • H37Rv.hypoxia.12hr.rep.3
  • H37Rv.hypoxia.1.day.rep.4
  • H37Rv.hypoxia.1.day.rep.5
  • H37Rv.hypoxia.1.day.rep.7
  • H37Rv.hypoxia.1.day.rep.9
  • H37Rv.hypoxia.4.day.rep.4
  • H37Rv.hypoxia.7.day.rep.1
  • H37Rv.hypoxia.7.day.rep.2
  • H37Rv.hypoxia.7.day.rep.5
  • H37Rv.hypoxia.7.day.rep.6
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
  • CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
  • CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Mtb.Erdman.strain.20.ppm.CO.rep.1
  • Mtb.Erdman.strain.20.ppm.CO.rep.2
  • Mtb.Erdman.strain.2000.ppm.CO.rep.1
  • Mtb.response.to.pH.5.5..6.replicates.
  • Mtb.response.to.pH.6.5..6.replicates.
  • BCG.2hr.phagosomal.profile
  • BCG.24hr.phagosomal.profile
  • M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
  • M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
  • MTB.in.Wild.type.macrophages.for.4hrs
  • MTB.in.Wild.type.macrophages.for.24hrs
  • MTB.in.Wild.type.macrophages.for.48hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.24hrs
  • Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
  • Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
  • Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
  • Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
  • Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
  • Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
  • Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
  • Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
  • Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
  • Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
  • Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
  • Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
  • Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
  • SG2.D0_N02A01c5
  • SG6.G0_N5A02cy.5
  • SG7.AT0_N11A01cy.5
  • SG7.BT0_N11A02cy.5
  • SG7.DT0_N11A04cy.5
  • SG8.B.Day.0.pre_N37A12cy.3
  • SG8.C.Day.0.post_N27A08cy.3
  • SG8.D.Day.0.pre_N27A10cy.3
  • SG8.D.Day.0.post_N27A11cy.3
  • SG8.C.Day.1_N37A11cy.5
  • SG8.C.Day.1_N27A09cy.3
  • SG8.D.Day.1_N27A12cy.3
  • SG8.B.Day.1_N37A05cy.5
  • SG8.A.Day.1_fix_N37A03cy.5
  • SG7.DT1_N11A08cy.5
  • SG7.CT1_N11A07cy.5
  • SG7.BT1_N11A06cy.5
  • SG7.AT1_N11A05cy.5
  • SG6_B1_N7A11cy.5
  • SG6_A1_N7A11cy.3
  • SG6.D1_N5A05cy.5
  • SG6.C1_N5A04cy.5
  • SG2.A1_N02A02c3
  • SG8.A.Day.2_N37A08cy.3
  • SG8.C.Day.2_N37A12cy.5
  • SG8.B.Day.2_N37A06cy.5
  • SG2.A2_N02A03c3
  • SG2.B2_N02A11c3
  • SG2.D2_N02A03c5
  • SG8.A.Day.3_N37A09cy.3
  • SG8.B.Day.3_N37A07cy.5
  • SG2.B3_N02A12c3
  • SG2.D3_N02A04c5
  • SG8.B.Day.5_N37A08cy.5
  • SG2.A5_N02A05c3
  • SG2.D7_N02A06c5
  • SG7.T7B_N11A09cy.5
  • SG7.T7C_N11A10cy.5
  • SG7.T7D_N11A11cy.5
  • SG8.B.Day.7_N37A09cy.5
  • SG.ISB.3.7B_N30A03cy.3
  • SG.ISB.3.7C_N30A03cy.5
  • SG12.C0_N32A05cy.5
  • SG12.A0_N32A01cy.3
  • SG12.B2_N32A11cy.3
  • SG12.C2_N32A07cy.5
  • SG12.A4_N32A04cy.3
  • SG12.C4_N32A08cy.5
  • SG12.B6_N32A01cy.5
  • SG12.C6_N32A09cy.5
  • SG12.A8_N32A06cy.3
  • SG12.B8_N32A02cy.5
  • SG12.C24_N32A11cy.5
  • SG12.B24_N32A03cy.5
  • SG12.A24_N32A07cy.3
  • SG2.D8_N02A07c5
  • SG6D.T8_N11A03cy.3
  • SG6.D8_N5A09cy.5
  • SG6.B8_N5A07cy.5
  • SG7.T8C_N11A07cy.3
  • SG7.T8B_N11A06cy.3
  • SG7.T8A_N11A05cy.3
  • SG7.T8D_N11A08cy.3
  • SG2.A9_N02A08c3
  • SG2.B9_N02A12c5
  • SG2.D9_N02A08c5
  • SG6.C11_N5A12cy.5
  • SG6.B11_N5A11cy.5
  • SG6.A11_N5A10cy.5
  • SG7.T12D_N11A12cy.3
  • SG7.T12C_N11A11cy.3
  • SG7.T12B_N11A10cy.3
  • SG7.T12A_N11A09cy.3
  • SG12.B120_N32A04cy.5
  • SG12.A120_N32A08cy.3
  • SG.ISB.3.12A_N30A06cy.5
  • SG.ISB.3.12B_N30A07cy.3
  • SG.ISB.3.12D_N30A08cy.3
  • SG6D.T14_N11A04cy.3
  • WT_140mM_NaCl_Rep1
  • WT_140mM_NaCl_Rep3
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.1
  • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.3
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.1
  • MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.3
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.1
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.2
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.3
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.4
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.1
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.3
  • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.2
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.2
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.3
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.2
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.4
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.1
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.2
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.3
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.5
  • X20ug.mL.Prcp.6776.DMSO..6h..1
  • X20ug.mL.Procept6776vsDMSO..6h
  • X30ug.mLProcept6776vsDMSO.6h
  • X5ug.mLProcept.6778vsDMSO.6h
  • X5ug.mLProcept.6778vsDMSO.6hA
  • X20ug.mL.Prcp.6778.DMSO..6h..1
  • X20ug.mL.Prcp.6778.DMSO..6h..2
  • X20ug.mLProcept6778vsDMSO.6h
  • X20ug.mLProcept6778vsDMSO.6hB
  • X40ug.mLProcept6778vsDMSO.6hA
  • X10ug.mL.PA.1vsDMSO..6hA
  • X10ug.mL.PA.1vsDMSO..6hB
  • X50ug.mL.PA.1vsDMSO..6h
  • X10ug.mL.PA.21vsDMSO..6h
  • X10ug.mL.PA.21vsDMSO..6hA
  • X0.2ug.mL.PA824.DMSO..6h..1
  • X0.2ug.mL.PA824.DMSO..6h..2
  • X0.4ug.mL.PA824.DMSO..6h..1
  • X0.4ug.mL.PA824.DMSO..6h..3
  • X0.4ug.mL.PA824.DMSO..6h..4
  • X2ug.mL.PA824.DMSO..6h..2
  • X0.1ug.mL.Mtmvsctrl..0.33h..y
  • X0.1ug.mL.Mtmvsctrl..0.75h..y
  • X0.1ug.mL.Mtmvsctrl..1.5h..y
  • X0.2ug.mL.Mtmvsctrl..0.33h..y
  • X0.2ug.mL.Mtmvsctrl..0.75h..y
  • X0.2ug.mL.Mtmvsctrl..2h..y
  • X0.2ug.mL.Mtmvsctrl..2h.A.y
  • X0.2ug.mL.Mtmvsctrl..2h.B.y
  • X0.2ug.mL.Mtmvsctrl..2h.C.y
  • X0.2ug.mL.Mtmvsctrl..4h..y
  • X0.2ug.mL.Mtmvsctrl..4h.A.y
  • X0.2ug.mL.Mtmvsctrl..4h.B.y
  • X0.2ug.mL.Mtm.ctrl..4h...1.y
  • X0.2ug.mL.Mtm.ctrl..4h...2.y
  • Mtm.0.2ug.mL.vs.ctrl.8h.2.y
  • X10ug.mL.Amikacin.EtOH..6h
  • X10ug.mL.capreomycinvsEtOH..6h
  • X5ug.mL.KCN.DMSO..6h..2
  • X10ug.mL.Nvb.DMSO..6h..1
  • X10ug.mL.Nvb.DMSO..6h..3
  • X5ug.mL.OfloxvsEtOH..6hA
  • X10ug.mL.OfloxvsDMSO..6h
  • X10ug.mL.OfloxvsDMSO..6hA
  • X10ug.mL.RoxvsEtOH..6h
  • X30ug.mL.RoxvsEtOH..6h
  • X30ug.mL.RoxvsEtOH..6hA
  • X50ug.mL.RoxvsEtOH..6hA
  • X2ug.mL.SMvsEtOH..6h
  • X2ug.mL.SMvsEtOH..6hA
  • X5ug.mL.TetvsEtOH..6h
  • X10ug.mL.TetvsEtOH..6h
  • X10ug.mL.TetvsEtOH..6hA
  • X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.y
  • X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.y
  • X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1
  • X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.x
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4
  • X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.x
  • X2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
  • Tet_100uM_30M_01
  • Tet_20uM_30M_01
  • Tet_500ng_30M_01
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.y
  • X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.y
  • MTB.at.T0..biological.rep2
  • MTB.at.T0..biological.rep3
  • MTB.at.T0..biological.rep4
  • MTB.at.T30..biological.rep1
  • MTB.at.T30..biological.rep2
  • MTB.at.T30..biological.rep3
  • MTB.at.T60..biological.rep1
  • MTB.at.T60..biological.rep2
  • MTB.at.T180..biological.rep1
  • MTB.at.T360..biological.rep1
  • MTB.at.T360..biological.rep3
  • MTB.at.T360..biological.rep4