Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0015c
• Rv0350
• Rv0351
• Rv0353
• Rv0980c
• Rv1011
• Rv1054
• Rv1631
• Rv1869c
• Rv2010
• Rv2327
• Rv2366c
• Rv2918c
• Rv3540c
• Rv3567c
• Rv3581c
• Rv3595c
• Rv3625c

Bicluster Conditions

• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.x
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3.x
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6.x
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.7.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.3
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1.x
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2.x
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.3
• pH4.8vspH6.8..2h.B
• pH4.8vspH6.8..4h.A
• pH4.8vspH6.8..5h.
• pH4.8vspH6.8..5.5h.
• pH4.8vspH6.8..7h.
• pH4.8vspH6.8..11h.
• pH5.2vspH6.8..5h.
• pH5.2vspH6.8..5.5h.
• pH5.2vspH6.8..10.5h.
• pH5.2vspH6.8..16h.
• pH5.6vspH6.8..2h.
• pH5.6vspH6.8..4h.B
• pH5.6vspH6.8..5h.
• pH5.6vspH6.8..11h.
• X0.02mM.GSNOvsDMSO..6h
• X0.1mM.GSNOvsDMSO..4h
• X0.1mM.GSNOvsDMSO..6h.
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
• Starvation_1254_12h_01
• Starvation_1254_12h_02
• Starvation_1254_24h_01
• Starvation_1254_24h_02
• Starvation_1254_24h_05
• Starvation_1254_24h_06
• Starvation_1254_24h_08
• Starvation_1254_3d_01
• Starvation_1254_3d_02
• Starvation_1254_3d_03
• Starvation_1254_3d_04
• Starvation_1254_5d_01
• Starvation_1254_5d_02
• Starvation_1254_5d_03
• Starvation_1254_5d_04
• Starvation_1254_6h_01
• Starvation_1254_6h_03
• Starvation_1254_6h_04
• Starvation_1254_6h_05
• Starvation_1254_6h_06
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
• Mtb.Erdman.strain.2000.ppm.CO.rep.1
• Mtb.response.to.pH.6.5..6.replicates.
• BCG.2hr.phagosomal.profile
• BCG.24hr.phagosomal.profile
• M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
• MTB.in.Wild.type.macrophages...IFNg.for.48hrs
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.y
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.7.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.6
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.3
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1.y
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2.y
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1.y
• MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.3
• MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.5
• Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
• Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
• Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
• WT_140mM_NaCl_Rep3
• WT_140mM_NaCl_Rep4